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CFAP92 cilia and flagella associated protein 92 (putative) [ Homo sapiens (human) ]

Gene ID: 57501, updated on 26-Oct-2022

Summary

Official Symbol
CFAP92provided by HGNC
Official Full Name
cilia and flagella associated protein 92 (putative)provided by HGNC
Primary source
HGNC:HGNC:29231
See related
Ensembl:ENSG00000114656 AllianceGenome:HGNC:29231
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAP92; KIAA1257
Expression
Broad expression in testis (RPKM 2.9), skin (RPKM 2.2) and 24 other tissues See more
Orthologs
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Genomic context

See CFAP92 in Genome Data Viewer
Location:
3q21.3
Exon count:
23
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (128909873..129026748, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (131654595..131748883, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (128628716..128722845, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene IFT122 pseudogene 3 Neighboring gene ACAD9 divergent transcript Neighboring gene acyl-CoA dehydrogenase family member 9 Neighboring gene EF-hand and coiled-coil domain containing 1 Neighboring gene JMJD4 pseudogene 1 Neighboring gene glycoprotein IX platelet

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ31815, FLJ43738

General protein information

Preferred Names
uncharacterized protein CFAP92; uncharacterized protein KIAA1257
Names
putative cilia and flagella associated protein 92

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001348520.2NP_001335449.1  uncharacterized protein CFAP92 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (a).
    Source sequence(s)
    AC112484
  2. NM_001348521.2NP_001335450.1  uncharacterized protein CFAP92 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC112484
  3. NM_001348522.2NP_001335451.1  uncharacterized protein CFAP92 isoform d

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4), as well as variant 5, encodes isoform d.
    Source sequence(s)
    AC112484
    Consensus CDS
    CCDS87133.1
    UniProtKB/Swiss-Prot
    Q9ULG3
    Conserved Domains (1) summary
    pfam15084
    Location:396
    DUF4550; Domain of unknown function (DUF4550)
  4. NM_001348523.2NP_001335452.1  uncharacterized protein CFAP92 isoform d

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5), as well as variant 4, encodes isoform d.
    Source sequence(s)
    AC112484, BC031632
    Consensus CDS
    CCDS87133.1
    UniProtKB/Swiss-Prot
    Q9ULG3
    Related
    ENSP00000422539.1, ENST00000515659.1
    Conserved Domains (1) summary
    pfam15084
    Location:396
    DUF4550; Domain of unknown function (DUF4550)
  5. NM_001394090.1NP_001381019.1  uncharacterized protein CFAP92 isoform e

    Status: VALIDATED

    Source sequence(s)
    AC112484
    Consensus CDS
    CCDS93370.1
    UniProtKB/TrEMBL
    A0A2R8YFM9
    Related
    ENSP00000496592.2, ENST00000645291.3
  6. NM_020741.3NP_065792.1  uncharacterized protein CFAP92 isoform c

    See identical proteins and their annotated locations for NP_065792.1

    Status: VALIDATED

    Source sequence(s)
    AC112484, BC038736
    Consensus CDS
    CCDS46905.1
    UniProtKB/Swiss-Prot
    Q8N5T4, Q9ULG3
    Related
    ENSP00000265068.5, ENST00000265068.9
    Conserved Domains (1) summary
    pfam15084
    Location:115208
    DUF4550; Domain of unknown function (DUF4550)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    128909873..129026748 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017006945.2XP_016862434.1  uncharacterized protein KIAA1257 isoform X3

  2. XM_011513050.3XP_011511352.2  uncharacterized protein KIAA1257 isoform X2

  3. XM_047448638.1XP_047304594.1  uncharacterized protein KIAA1257 isoform X4

  4. XM_047448639.1XP_047304595.1  uncharacterized protein KIAA1257 isoform X5

  5. XM_047448637.1XP_047304593.1  uncharacterized protein KIAA1257 isoform X1

  6. XM_047448640.1XP_047304596.1  uncharacterized protein KIAA1257 isoform X6

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    131654595..131748883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)