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uncharacterized protein [ Chlamydomonas reinhardtii ]

Gene ID: 5728898, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
Phytozome:Cre03.g173350
Locus tag
CHLRE_03g173350v5
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Chlamydomonas reinhardtii (strain: CC-503 cw92 mt+)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Old locus tag
CHLREDRAFT_127770
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Genomic context

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Location:
chromosome: 3
Exon count:
9
Sequence:
Chromosome: 3; NC_057006.1 (4128116..4132643)

Chromosome 3 - NC_057006.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057006.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Chlamydomonas genome reveals the evolution of key animal and plant functions. Merchant SS, et al. Science, 2007 Oct 12. PMID 17932292, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloroplast targeting sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein targeting to chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_057006.1 Reference assembly

    Range
    4128116..4132643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043060916.1 → XP_042926045.1  uncharacterized protein CHLRE_03g173350v5 [Chlamydomonas reinhardtii]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2K3DX75
    Conserved Domains (3) summary
    sd00045
    Location:274 → 305
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:247 → 338
    Ank_2; Ankyrin repeats (3 copies)
    cl17974
    Location:152 → 217
    STI1; STI1 domain

  2. XM_001703409.2 → XP_001703461.1  uncharacterized protein CHLRE_03g173350v5 [Chlamydomonas reinhardtii]

    See identical proteins and their annotated locations for XP_001703461.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q84X71
    Conserved Domains (2) summary
    cd00204
    Location:242 → 355
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:269 → 300
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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