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LMJF_36_5440 hypothetical protein [ Leishmania major strain Friedlin ]

Gene ID: 5655847, updated on 21-Dec-2023

Summary

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Gene symbol
LMJF_36_5440
Gene description
hypothetical protein
Locus tag
LMJF_36_5440
Gene type
protein coding
RNA name
conserved hypothetical protein
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 36
Exon count:
1
Sequence:
Chromosome: 36; NC_007287.2 (2099542..2101389, complement)

Chromosome 36 - NC_007287.2Genomic Context describing neighboring genes Neighboring gene putative branch point binding protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007287.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007287.2 Reference assembly

    Range
    2099542..2101389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001687079.1 → XP_001687131.1  conserved hypothetical protein [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_001687131.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q4Q0L7
    Conserved Domains (3) summary
    COG1196
    Location:109 → 171
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd01767
    Location:538 → 610
    UBX; Ubiquitin regulatory domain X (UBX) structurally similar to a beta-grasp ubiquitin-like fold
    cl02662
    Location:329 → 384
    SEP; SEP domain
Nucleotide Protein
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