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LMJF_31_2300 putative 3'-nucleotidase/nuclease [ Leishmania major strain Friedlin ]

Gene ID: 5654162, updated on 21-Dec-2023

Summary

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Gene symbol
LMJF_31_2300
Gene description
putative 3'-nucleotidase/nuclease
Locus tag
LMJF_31_2300
Gene type
protein coding
RNA name
putative 3'-nucleotidase/nuclease
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 31
Exon count:
1
Sequence:
Chromosome: 31; NC_007272.2 (1138947..1140095, complement)

Chromosome 31 - NC_007272.2Genomic Context describing neighboring genes Neighboring gene putative ADP-ribosylation factor Neighboring gene phosphatidylethanolaminen-methyltransferase-lik e protein Neighboring gene putative 3'-nucleotidase/nuclease precursor Neighboring gene helicase-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007272.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative 3'-nucleotidase/nuclease
XP_001685217.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007272.2 Reference assembly

    Range
    1138947..1140095 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001685165.1 → XP_001685217.1  putative 3'-nucleotidase/nuclease [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_001685217.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q4Q631, Q66VY6
    Conserved Domains (1) summary
    pfam02265
    Location:29 → 300
    S1-P1_nuclease; S1/P1 Nuclease
Nucleotide Protein
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