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LMJF_19_0660 putative DNA-directed RNA polymerase,alpha subunit [ Leishmania major strain Friedlin ]

Gene ID: 5651165, updated on 21-Dec-2023

Summary

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Gene symbol
LMJF_19_0660
Gene description
putative DNA-directed RNA polymerase,alpha subunit
Locus tag
LMJF_19_0660
Gene type
protein coding
RNA name
putative DNA-directed RNA polymerase,alpha subunit
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 19
Exon count:
1
Sequence:
Chromosome: 19; NC_007260.2 (284098..285426)

Chromosome 19 - NC_007260.2Genomic Context describing neighboring genes Neighboring gene putative extracellular receptor Neighboring gene hypothetical protein Neighboring gene putative U3 snoRNA-associated protein UTP11 Neighboring gene putative kinesin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007260.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase I activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase III activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative DNA-directed RNA polymerase,alpha subunit
XP_001682643.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007260.2 Reference assembly

    Range
    284098..285426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001682591.1 → XP_001682643.1  putative DNA-directed RNA polymerase,alpha subunit [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_001682643.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q4QDF5
    Conserved Domains (1) summary
    cd07032
    Location:107 → 424
    RNAP_I_II_AC40; AC40 subunit of Eukaryotic RNA polymerase (RNAP) I and RNAP III
Nucleotide Protein
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