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ankrd13d ankyrin repeat domain 13 family, member D [ Danio rerio (zebrafish) ]

Gene ID: 562931, updated on 14-May-2025
Official Symbol
ankrd13dprovided by ZNC
Official Full Name
ankyrin repeat domain 13 family, member Dprovided by ZNC
Primary source
ZFIN:ZDB-GENE-101007-3
See related
Ensembl:ENSDARG00000098140 AllianceGenome:ZFIN:ZDB-GENE-101007-3
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to be located in late endosome and plasma membrane. Predicted to be active in cytoplasm. Orthologous to human ANKRD13D (ankyrin repeat domain 13D). [provided by Alliance of Genome Resources, May 2025]
Orthologs
human mouse all
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Location:
chromosome: 14
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2025_04 current GRCz12tu (GCF_049306965.1) 14 NC_133189.1 (26095784..26129931)
RS_2024_08 previous assembly GRCz11 (GCF_000002035.6) 14 NC_007125.7 (21782807..21816706)

Chromosome 14 - NC_133189.1Genomic Context describing neighboring genes Neighboring gene syntaxin 3b Neighboring gene lysine (K)-specific demethylase 2Ab Neighboring gene C-terminal binding protein 1-like Neighboring gene spondin 2a, extracellular matrix protein

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in late endosome IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
ankyrin repeat domain-containing protein 13D

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RefSeqs of Annotated Genomes: GCF_049306965.1-RS_2025_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz12tu Primary Assembly

Genomic

  1. NC_133189.1 Reference GRCz12tu Primary Assembly

    Range
    26095784..26129931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009291049.5 → XP_009289324.2  ankyrin repeat domain-containing protein 13D isoform X1

  2. XM_686296.9 → XP_691388.4  ankyrin repeat domain-containing protein 13D isoform X2

  3. XM_073921810.1 → XP_073777911.1  ankyrin repeat domain-containing protein 13D isoform X3

Nucleotide Protein Strain
Heading Accession and Version

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