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DNAJC11 DnaJ heat shock protein family (Hsp40) member C11 [ Homo sapiens (human) ]

Gene ID: 55735, updated on 15-Apr-2019

Summary

Official Symbol
DNAJC11provided by HGNC
Official Full Name
DnaJ heat shock protein family (Hsp40) member C11provided by HGNC
Primary source
HGNC:HGNC:25570
See related
Ensembl:ENSG00000007923 MIM:614827
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
dJ126A5.1
Expression
Ubiquitous expression in kidney (RPKM 23.0), colon (RPKM 15.3) and 25 other tissues See more
Orthologs

Genomic context

See DNAJC11 in Genome Data Viewer
Location:
1p36.31
Exon count:
16
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 1 NC_000001.11 (6634168..6701906, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (6694228..6761966, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984913 Neighboring gene PHD finger protein 13 Neighboring gene THAP domain containing 3 Neighboring gene long intergenic non-protein coding RNA 1672 Neighboring gene CAMTA1 divergent transcript

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ10737

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
cristae formation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
colocalizes_with MICOS complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
colocalizes_with MICOS complex IDA
Inferred from Direct Assay
more info
PubMed 
colocalizes_with mitochondrial sorting and assembly machinery complex IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
dnaJ homolog subfamily C member 11
Names
DnaJ (Hsp40) homolog, subfamily C, member 11
novel DnaJ domain-containing protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_018198.4NP_060668.2  dnaJ homolog subfamily C member 11

    See identical proteins and their annotated locations for NP_060668.2

    Status: VALIDATED

    Source sequence(s)
    AF306695, AL031447, AL159177, DB461237
    Consensus CDS
    CCDS87.1
    UniProtKB/Swiss-Prot
    Q9NVH1
    Related
    ENSP00000366800.5, ENST00000377577.10
    Conserved Domains (2) summary
    pfam00226
    Location:1479
    DnaJ; DnaJ domain
    pfam11875
    Location:417549
    DUF3395; Domain of unknown function (DUF3395)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p12 Primary Assembly

    Range
    6634168..6701906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017001745.1XP_016857234.1  dnaJ homolog subfamily C member 11 isoform X1

    UniProtKB/TrEMBL
    B4DGD5
    Conserved Domains (1) summary
    pfam11875
    Location:327459
    DUF3395; Domain of unknown function (DUF3395)
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