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art4 ADP-ribosyltransferase 4 (inactive) (Dombrock blood group) [ Danio rerio (zebrafish) ]

Gene ID: 555597, updated on 12-Sep-2024

Summary

Official Symbol
art4provided by ZNC
Official Full Name
ADP-ribosyltransferase 4 (inactive) (Dombrock blood group)provided by ZNC
Primary source
ZFIN:ZDB-GENE-070725-5
See related
Ensembl:ENSDARG00000078178 AllianceGenome:ZFIN:ZDB-GENE-070725-5
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable NAD+ ADP-ribosyltransferase activity. Predicted to be involved in peptidyl-arginine ADP-ribosylation. Predicted to act upstream of or within protein ADP-ribosylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to several human genes including ART4 (ADP-ribosyltransferase 4 (inactive) (Dombrock blood group)). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (3679988..3686491)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (3994254..3999629)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene phospholipase B domain containing 1a Neighboring gene ecto-ADP-ribosyltransferase 5 Neighboring gene GPI-linked NAD(P)(+)--arginine ADP-ribosyltransferase 1 Neighboring gene interferon-induced very large GTPase 1-like

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables NAD+ ADP-ribosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables NAD+-protein-arginine ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables nucleotidyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ecto-ADP-ribosyltransferase 4
Names
ADP-ribosyltransferase 4 (Dombrock blood group)
NP_001303691.1
XP_068073154.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001316762.1NP_001303691.1  ecto-ADP-ribosyltransferase 4 precursor

    Status: VALIDATED

    Source sequence(s)
    BC065691, BX908804
    UniProtKB/TrEMBL
    A0A8M1P856, E7F1D1
    Related
    ENSDARP00000104235.3, ENSDART00000109618.4
    Conserved Domains (1) summary
    cl00173
    Location:33229
    VIP2; VIP2; A family of actin-ADP-ribosylating toxin. A member of the Bacillus-prodiced vegetative insecticidal proteins (VIPs) possesses high specificity against the major insect pest, corn rootworms, and belongs to a classs of binary toxins and regulators of ...

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    3679988..3686491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068217053.1XP_068073154.1  ecto-ADP-ribosyltransferase 4 isoform X1