Format

Send to:

Choose Destination

MIR31HG MIR31 host gene [ Homo sapiens (human) ]

Gene ID: 554202, updated on 12-Sep-2021

Summary

Official Symbol
MIR31HGprovided by HGNC
Official Full Name
MIR31 host geneprovided by HGNC
Primary source
HGNC:HGNC:37187
See related
Ensembl:ENSG00000171889 MIM:616356
Gene type
ncRNA
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LncHIFCAR; hsa-lnc-31
Summary
This gene produces a long non-coding RNA that acts as a host gene for miR-31. This transcript may be involved in cellular pluripotency and regulate the differentiation of myoblasts and other tissues. This RNA was found to interact with Polycomb repressive proteins to repression transcription of genes involves in cell senescence. [provided by RefSeq, Dec 2017]
Expression
Biased expression in urinary bladder (RPKM 2.2), small intestine (RPKM 1.0) and 9 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See MIR31HG in Genome Data Viewer
Location:
9p21.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (21454268..21559798, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (21454267..21559797, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene interferon omega 1 pseudogene 2 Neighboring gene interferon alpha 1 Neighboring gene interferon omega 1 pseudogene 19 Neighboring gene interferon epsilon Neighboring gene microRNA 31 Neighboring gene H3 histone pseudogene 30 Neighboring gene uncharacterized LOC107987026 Neighboring gene KH-type splicing regulatory protein pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

Associated conditions

Description Tests
THOC5: a novel gene involved in HDL-cholesterol metabolism.
GeneReviews: Not available

General gene information

Markers

Homology

Other Names

  • MIR31 host gene (non-protein coding)
  • long noncoding HIF-1I+/- co-activating RNA
  • long noncoding HIF-1alpha co-activating RNA

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027054.2 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AK124391, BX363267, CA440917, HY159738
    Related
    ENST00000304425.4
  2. NR_152877.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AL137022, AL353732
  3. NR_152878.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AL137022, AL353732
    Related
    ENST00000663833.1
  4. NR_152879.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AL137022, AL353732
    Related
    ENST00000670459.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    21454268..21559798 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center