U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FAM86C1P family with sequence similarity 86 member C1, pseudogene [ Homo sapiens (human) ]

Gene ID: 55199, updated on 28-Apr-2022

Summary

Official Symbol
FAM86C1Pprovided by HGNC
Official Full Name
family with sequence similarity 86 member C1, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:25561
See related
Ensembl:ENSG00000158483 MIM:616124; AllianceGenome:HGNC:25561
Gene type
unknown
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM86C; FAM86C1
Summary
Predicted to enable protein-L-histidine N-tele-methyltransferase activity. Predicted to be involved in peptidyl-histidine methylation, to form tele-methylhistidine. Part of protein-containing complex. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in thyroid (RPKM 3.4), endometrium (RPKM 1.8) and 25 other tissues See more
Orthologs

Genomic context

See FAM86C1P in Genome Data Viewer
Location:
11q13.4
Exon count:
8
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (71787514..71799661)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (71714420..71726582)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein polypeptide C pseudogene 14 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 8 Neighboring gene XNDC1N-ZNF705EP-ALG1L9P readthrough Neighboring gene ALG1 like 9, pseudogene Neighboring gene zinc finger protein 705E, pseudogene Neighboring gene defensin beta 108B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Other Names

  • family with sequence similarity 86, member C
  • protein FAM86C1

Clone Names

  • FLJ10661, FLJ27199, MGC45068

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein-L-histidine N-tele-methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in peptidyl-histidine methylation, to form tele-methylhistidine IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
part_of protein-containing complex IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    71787514..71799661
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004643250.2 RNA Sequence

    Related
    ENST00000675931.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    71714420..71726582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007082281.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001099653.1: Suppressed sequence

    Description
    NM_001099653.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  2. NM_018172.3: Suppressed sequence

    Description
    NM_018172.3: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  3. NM_152563.2: Suppressed sequence

    Description
    NM_152563.2: This RefSeq was removed because it is now thought that this gene is a pseudogene.