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FAM86C1P family with sequence similarity 86 member C1, pseudogene [ Homo sapiens (human) ]

Gene ID: 55199, updated on 5-Jan-2022

Summary

Official Symbol
FAM86C1Pprovided by HGNC
Official Full Name
family with sequence similarity 86 member C1, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:25561
See related
Ensembl:ENSG00000158483 MIM:616124
Gene type
unknown
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM86C; FAM86C1
Summary
Predicted to enable protein-L-histidine N-tele-methyltransferase activity. Predicted to be involved in peptidyl-histidine methylation, to form tele-methylhistidine. Part of protein-containing complex. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Ubiquitous expression in thyroid (RPKM 3.4), endometrium (RPKM 1.8) and 25 other tissues See more
Orthologs

Genomic context

See FAM86C1P in Genome Data Viewer
Location:
11q13.4
Exon count:
8
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (71787506..71801239)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein polypeptide C pseudogene 14 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 8 Neighboring gene XNDC1N-ZNF705EP-ALG1L9P readthrough Neighboring gene uncharacterized LOC105379409 Neighboring gene ALG1 like 9, pseudogene Neighboring gene zinc finger protein 705E, pseudogene Neighboring gene defensin beta 108B

Genomic regions, transcripts, and products

Genomic Sequence:
NC_000011.10 Chromosome 11 Reference GRCh38.p13 Primary Assembly

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Other Names

  • family with sequence similarity 86, member C
  • protein FAM86C1

Clone Names

  • FLJ10661, FLJ27199, MGC45068

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein-L-histidine N-tele-methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in peptidyl-histidine methylation, to form tele-methylhistidine IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
part_of protein-containing complex IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    71787506..71801239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004643250.1 RNA Sequence

    Related
    ENST00000686911.1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001099653.1: Suppressed sequence

    Description
    NM_001099653.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  2. NM_018172.3: Suppressed sequence

    Description
    NM_018172.3: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  3. NM_152563.2: Suppressed sequence

    Description
    NM_152563.2: This RefSeq was removed because it is now thought that this gene is a pseudogene.
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