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TfIIFbeta transcription factor TFIIFbeta [ Apis mellifera (honey bee) ]

Gene ID: 551470, updated on 22-May-2024

Summary

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Gene symbol
TfIIFbeta
Gene description
transcription factor TFIIFbeta
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB50872
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: LG10
Exon count:
7
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG10 Unlocalized Scaffold NW_020555815.1 (24552..26465)
103 previous assembly Amel_4.5 (GCF_000002195.4) Unplaced Scaffold NW_003378425.1 (33904..36341)

NW_020555815.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase SIK2 Neighboring gene mitochondrial ribosomal protein L41 Neighboring gene mannose phosphate isomerase Neighboring gene ribosomal protein L30

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIF subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NW_020555815.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    24552..26465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_623865.6 → XP_623868.1  general transcription factor IIF subunit 2

    See identical proteins and their annotated locations for XP_623868.1

    UniProtKB/TrEMBL
    A0A7M7RC14, A0A8B9B154
    Conserved Domains (2) summary
    cd07980
    Location:9 → 129
    TFIIF_beta; Transcription initiation factor IIF, beta subunit
    pfam02270
    Location:187 → 250
    TFIIF_beta; Transcription initiation factor IIF, beta subunit
Nucleotide Protein Strain
Heading Accession and Version

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