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TUG1 taurine up-regulated 1 [ Homo sapiens (human) ]

Gene ID: 55000, updated on 26-Oct-2021

Summary

Official Symbol
TUG1provided by HGNC
Official Full Name
taurine up-regulated 1provided by HGNC
Primary source
HGNC:HGNC:26066
See related
Ensembl:ENSG00000253352 MIM:614971
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TI-227H; LINC00080; NCRNA00080
Expression
Ubiquitous expression in testis (RPKM 36.1), endometrium (RPKM 31.7) and 25 other tissues See more
Orthologs
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Genomic context

See TUG1 in Genome Data Viewer
Location:
22q12.2
Exon count:
4
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 22 NC_000022.11 (30969211..30979395)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (31365197..31375381)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein 2 Neighboring gene uncharacterized LOC107985544 Neighboring gene eukaryotic translation initiation factor 4H pseudogene 2 Neighboring gene MORC2 antisense RNA 1 Neighboring gene MORC family CW-type zinc finger 2 Neighboring gene RNA, 7SL, cytoplasmic 633, pseudogene Neighboring gene smoothelin

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ20618, MGC46067

General protein information

Preferred Names
taurine up-regulated 1
Names
taurine upregulated gene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_152867.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004542
    Related
    ENST00000646496.1
  2. NR_152868.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004542

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p13 Primary Assembly

    Range
    30969211..30979395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_017903.2: Suppressed sequence

    Description
    NM_017903.2: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
  2. NR_110493.2: Suppressed sequence

    Description
    NR_110493.2: This RefSeq was removed because it is now thought that this gene does encode a protein.
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