U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC548082 glutamate--ammonia ligase [ Glycine max (soybean) ]

Gene ID: 548082, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC548082
Gene description
glutamate--ammonia ligase
Locus tag
GLYMA_11G215500v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Also known as
GS; GS1-1; GS1beta1
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 11 NC_038247.2 (35760291..35764635, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 11 NC_038247.1 (30885378..30889720, complement)

Chromosome 11 - NC_038247.2Genomic Context describing neighboring genes Neighboring gene aspartic proteinase PCS1 Neighboring gene kinesin light chain 3 Neighboring gene condensin complex subunit 3 Neighboring gene nudix hydrolase family protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The 5' untranslated region of the soybean cytosolic glutamine synthetase β(1) gene contains prokaryotic translation initiation signals and acts as a translational enhancer in plants. Ortega JL, et al. Mol Genet Genomics, 2012 Dec. PMID 23080263, Free PMC Article
  2. Constitutive overexpression of cytosolic glutamine synthetase (GS1) gene in transgenic alfalfa demonstrates that GS1 may be regulated at the level of RNA stability and protein turnover. Ortega JL, et al. Plant Physiol, 2001 May. PMID 11351075, Free PMC Article
  3. Ammonia-regulated expression of a soybean gene encoding cytosolic glutamine synthetase in transgenic Lotus corniculatus. Miao GH, et al. Plant Cell, 1991 Jan. PMID 1688099, Free PMC Article
  4. Forcing expression of a soybean root glutamine synthetase gene in tobacco leaves induces a native gene encoding cytosolic enzyme. Hirel B, et al. Plant Mol Biol, 1992 Oct. PMID 1356501
  5. Glutamine synthetase isoforms in nitrogen-fixing soybean nodules: distinct oligomeric structures and thiol-based regulation. Masalkar PD, et al. FEBS Lett, 2015 Jan 16. PMID 25497014

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. analytical ultracentrifugation experiments showed that GS1gamma is a dodecamer, whereas the GS1beta is a decamer. It is proposed that this difference contributes to the differential thiol sensitivity of each isoform, and that GS1gamma1 may be a target of thiol-based regulation. [GS1beta]
    Title: Glutamine synthetase isoforms in nitrogen-fixing soybean nodules: distinct oligomeric structures and thiol-based regulation.
  2. The 5' untranslated region of the soybean cytosolic glutamine synthetase beta(1) gene contains prokaryotic translation initiation signals and acts as a translational enhancer.
    Title: The 5' untranslated region of the soybean cytosolic glutamine synthetase β(1) gene contains prokaryotic translation initiation signals and acts as a translational enhancer in plants.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutamine synthetase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glutamine synthetase cytosolic isozyme 1
Names
chloroplast glutamine synthetase
cytosolic glutamine synthetase GSbeta1
glutamine synthetase, cytosolic
NP_001238531.2
XP_006590378.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001251602.2 → NP_001238531.2  glutamine synthetase cytosolic isozyme 1

    Status: VALIDATED

    Source sequence(s)
    ACUP04004027, AK244891
    UniProtKB/Swiss-Prot
    P24099
    UniProtKB/TrEMBL
    Q9FUK4
    Conserved Domains (1) summary
    PLN02284
    Location:1 → 354
    PLN02284; glutamine synthetase

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038247.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    35760291..35764635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006590315.4 → XP_006590378.1  glutamine synthetase cytosolic isozyme 1 isoform X1

    UniProtKB/TrEMBL
    I1LMB4
    Conserved Domains (1) summary
    PLN02284
    Location:1 → 260
    PLN02284; glutamine synthetase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P24099.1 GenPept UniProtKB/Swiss-Prot:P24099

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials