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Bcole1 Bcole1 [ Botrytis cinerea B05.10 ]

Gene ID: 5428213, updated on 21-Dec-2023

Summary

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Gene symbol
Bcole1
Gene description
Bcole1
Locus tag
BCIN_07g06310
Gene type
protein coding
RNA name
Bcole1
RefSeq status
PROVISIONAL
Organism
Botrytis cinerea B05.10 (strain: B05.10)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis
Old locus tag
BC1G_13792
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Genomic context

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See Bcole1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Sequence:
Chromosome: 7; NC_037316.1 (2323135..2325218, complement)

Chromosome 7 - NC_037316.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037316.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A gapless genome sequence of the fungus Botrytis cinerea. Van Kan JA, et al. Mol Plant Pathol, 2017 Jan. PMID 26913498, Free PMC Article
  2. Genome update of Botrytis cinerea strains B05.10 and T4. Staats M, et al. Eukaryot Cell, 2012 Nov. PMID 23104368, Free PMC Article
  3. Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. Amselem J, et al. PLoS Genet, 2011 Aug. PMID 21876677, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables stearoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in unsaturated fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Bcole1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037316.1 Reference assembly

    Range
    2323135..2325218 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001547712.2 → XP_001547762.1  Bcole1 [Botrytis cinerea B05.10]

    See identical proteins and their annotated locations for XP_001547762.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A384JNH2, G2YUM6, M7UVI1
    Conserved Domains (2) summary
    cl00615
    Location:29 → 315
    Membrane-FADS-like; The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins. They are present in all groups of organisms with the ...
    pfam00173
    Location:344 → 418
    Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain
Nucleotide Protein
Heading Accession and Version

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