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TOLLIP toll interacting protein [ Bos taurus (domestic cattle) ]

Gene ID: 539480, updated on 17-Aug-2024

Summary

Official Symbol
TOLLIPprovided by VGNC
Official Full Name
toll interacting proteinprovided by VGNC
Primary source
VGNC:VGNC:36216
See related
BGD:BT10418; Ensembl:ENSBTAG00000008237
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See TOLLIP in Genome Data Viewer
Location:
chromosome: 29
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (50169914..50185635)

Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene BR serine/threonine kinase 2 Neighboring gene uncharacterized LOC112444918 Neighboring gene mucin 5B, oligomeric mucus/gel-forming Neighboring gene mucin 5AC, oligomeric mucus/gel-forming

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

Pathways from PubChem

General gene information

Clone Names

  • MGC139368

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039961.1NP_001035050.1  toll-interacting protein

    See identical proteins and their annotated locations for NP_001035050.1

    Status: PROVISIONAL

    Source sequence(s)
    BT021785
    UniProtKB/TrEMBL
    A0AAA9THA1
    Related
    ENSBTAP00000097621.1, ENSBTAT00000113084.1
    Conserved Domains (2) summary
    cd04016
    Location:52172
    C2_Tollip; C2 domain present in Toll-interacting protein (Tollip)
    cd14363
    Location:229269
    CUE_TOLIP; CUE domain found in the C-terminal of toll-interacting protein (Tollip) and similar proteins

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    50169914..50185635
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059882990.1XP_059738973.1  toll-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0AAF6YRW2
    Related
    ENSBTAP00000010835.6, ENSBTAT00000010835.7