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ZMYM5 zinc finger MYM-type containing 5 [ Bos taurus (domestic cattle) ]

Gene ID: 536389, updated on 17-Aug-2024

Summary

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Official Symbol
ZMYM5provided by VGNC
Official Full Name
zinc finger MYM-type containing 5provided by VGNC
Primary source
VGNC:VGNC:56647
See related
BGD:BT13943; Ensembl:ENSBTAG00000007167
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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Genomic context

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Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (36235480..36261519)

Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene gap junction protein alpha 3 Neighboring gene zinc finger MYM-type containing 2 Neighboring gene paraspeckle component 1 Neighboring gene M-phase phosphoprotein 8 Neighboring gene poly(ADP-ribose) polymerase family member 4 Neighboring gene antizyme inhibitor 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger MYM-type protein 5
Names
zinc finger, MYM-type 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195018.1 → NP_001181947.1  zinc finger MYM-type protein 5

    See identical proteins and their annotated locations for NP_001181947.1

    Status: PROVISIONAL

    Source sequence(s)
    GJ062078
    UniProtKB/Swiss-Prot
    A6QPH9, Q1JQB9
    Related
    ENSBTAP00000009433.5, ENSBTAT00000009433.6
    Conserved Domains (2) summary
    smart00597
    Location:563 → 638
    ZnF_TTF; zinc finger in transposases and transcription factors
    pfam06467
    Location:373 → 416
    zf-FCS; MYM-type Zinc finger with FCS sequence motif

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    36235480..36261519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005213786.5 → XP_005213843.1  zinc finger MYM-type protein 5 isoform X1

    See identical proteins and their annotated locations for XP_005213843.1

    UniProtKB/Swiss-Prot
    A6QPH9, Q1JQB9
    Conserved Domains (2) summary
    smart00597
    Location:563 → 638
    ZnF_TTF; zinc finger in transposases and transcription factors
    pfam06467
    Location:373 → 416
    zf-FCS; MYM-type Zinc finger with FCS sequence motif

  2. XM_059892083.1 → XP_059748066.1  zinc finger MYM-type protein 5 isoform X2

    UniProtKB/TrEMBL
    A0AAA9SB88

  3. XM_005213788.4 → XP_005213845.1  zinc finger MYM-type protein 5 isoform X1

    See identical proteins and their annotated locations for XP_005213845.1

    UniProtKB/Swiss-Prot
    A6QPH9, Q1JQB9
    Conserved Domains (2) summary
    smart00597
    Location:563 → 638
    ZnF_TTF; zinc finger in transposases and transcription factors
    pfam06467
    Location:373 → 416
    zf-FCS; MYM-type Zinc finger with FCS sequence motif
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A6QPH9.2 GenPept UniProtKB/Swiss-Prot:A6QPH9

Gene LinkOut

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