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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_054895.1 RefSeqGene
- Range
-
5153..129067
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001039840.4 → NP_001034929.2 cysteine-rich hydrophobic domain-containing protein 1 isoform 1
See identical proteins and their annotated locations for NP_001034929.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AL356513, AL358796
- Consensus CDS
-
CCDS35335.2
- UniProtKB/Swiss-Prot
- Q5CZ84, Q5VXU3
- Related
- ENSP00000362601.5, ENST00000373502.10
- Conserved Domains (1) summary
-
- pfam10256
Location:105 → 137
- Erf4; Golgin subfamily A member 7/ERF4 family
-
NM_001300884.1 → NP_001287813.1 cysteine-rich hydrophobic domain-containing protein 1 isoform 2
See identical proteins and their annotated locations for NP_001287813.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an exon in the 3' coding region comapred to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AL356513, AL358796, BC127727
- Consensus CDS
-
CCDS75993.1
- UniProtKB/Swiss-Prot
-
Q5VXU3
- Related
- ENSP00000362603.5, ENST00000373504.10
- Conserved Domains (1) summary
-
- pfam10256
Location:105 → 137
- Erf4; Golgin subfamily A member 7/ERF4 family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
73563148..73687111
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017029582.2 → XP_016885071.1 cysteine-rich hydrophobic domain-containing protein 1 isoform X1
-
XM_017029584.2 → XP_016885073.1 cysteine-rich hydrophobic domain-containing protein 1 isoform X3
-
XM_017029583.2 → XP_016885072.1 cysteine-rich hydrophobic domain-containing protein 1 isoform X2
RNA
-
XR_001755699.2 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
71996510..72120438
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)