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BBS5 Bardet-Biedl syndrome 5 [ Bos taurus (domestic cattle) ]

Gene ID: 528191, updated on 10-Aug-2024

Summary

Gene symbol
BBS5
Gene description
Bardet-Biedl syndrome 5
See related
BGD:BT21792; Ensembl:ENSBTAG00000010736
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See BBS5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (26753219..26774543, complement)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene FAST kinase domains 1 Neighboring gene uncharacterized LOC104971168 Neighboring gene kelch like family member 41 Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene LDL receptor related protein 2

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in intracellular transport IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of BBSome IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
Bardet-Biedl syndrome 5 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001101132.2NP_001094602.1  Bardet-Biedl syndrome 5 protein

    See identical proteins and their annotated locations for NP_001094602.1

    Status: PROVISIONAL

    Source sequence(s)
    BC147950
    UniProtKB/TrEMBL
    A0AAF6DM83, A6QLF9, F1N5K5
    Related
    ENSBTAP00000014216.5, ENSBTAT00000014216.6
    Conserved Domains (1) summary
    pfam07289
    Location:7339
    BBL5; Bardet-Biedl syndrome 5 protein

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    26753219..26774543 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059874989.1XP_059730972.1  Bardet-Biedl syndrome 5 protein isoform X2

    UniProtKB/TrEMBL
    A0AAA9S4Q2, A0AAF6DM83
    Related
    ENSBTAP00000077117.1, ENSBTAT00000105211.1
  2. XM_024975282.2XP_024831050.1  Bardet-Biedl syndrome 5 protein isoform X1

    UniProtKB/TrEMBL
    A0AAA9T3T9, A0AAF6DM83
    Related
    ENSBTAP00000091312.1, ENSBTAT00000100324.1
    Conserved Domains (1) summary
    pfam07289
    Location:7331
    BBL5; Bardet-Biedl syndrome 5 protein