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SLC44A4 solute carrier family 44 member 4 [ Bos taurus (cattle) ]

Gene ID: 520625, updated on 13-Nov-2018

Summary

Official Symbol
SLC44A4provided by VGNC
Official Full Name
solute carrier family 44 member 4provided by VGNC
Primary source
VGNC:VGNC:34878
See related
BGD:BT10283; Ensembl:ENSBTAG00000005675
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
CTL4
Orthologs

Genomic context

See SLC44A4 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
21
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 23 NC_037350.1 (27480850..27494226)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 23 AC_000180.1 (27291966..27305342)

Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 12 Neighboring gene euchromatic histone lysine methyltransferase 2 Neighboring gene neuraminidase 1 Neighboring gene uncharacterized LOC104975663 Neighboring gene small nucleolar RNA SNORD52

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Markers

Homology

Clone Names

  • MGC154986

Gene Ontology Provided by GOA

Function Evidence Code Pubs
choline transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
thiamine pyrophosphate transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
acetylcholine biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
acetylcholine secretion ISS
Inferred from Sequence or Structural Similarity
more info
 
choline transport ISS
Inferred from Sequence or Structural Similarity
more info
 
neuromast hair cell development ISS
Inferred from Sequence or Structural Similarity
more info
 
otolith formation ISS
Inferred from Sequence or Structural Similarity
more info
 
positive regulation of cell growth ISS
Inferred from Sequence or Structural Similarity
more info
 
thiamine pyrophosphate transmembrane transport ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
apical plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
choline transporter-like protein 4
Names
thiamine pyrophosphate transporter 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001083442.1NP_001076911.1  choline transporter-like protein 4

    See identical proteins and their annotated locations for NP_001076911.1

    Status: PROVISIONAL

    Source sequence(s)
    BC133403
    UniProtKB/Swiss-Prot
    A3KMY4
    Related
    ENSBTAP00000042762.3, ENSBTAT00000045367.3
    Conserved Domains (1) summary
    pfam04515
    Location:312671
    Choline_transpo; Plasma-membrane choline transporter

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037350.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    27480850..27494226
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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