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CDKN2A-DT CDKN2A divergent transcript [ Homo sapiens (human) ]

Gene ID: 51198, updated on 17-May-2022

Summary

Official Symbol
CDKN2A-DTprovided by HGNC
Official Full Name
CDKN2A divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:23831
See related
AllianceGenome:HGNC:23831
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C9orf53; bA149I2.3; CDKN2A-AS1
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Genomic context

See CDKN2A-DT in Genome Data Viewer
Location:
9p21.3
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (21967139..21967754)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (21981439..21982054)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (21967138..21967753)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107987026 Neighboring gene RNA, 7SL, cytoplasmic 151, pseudogene Neighboring gene KH-type splicing regulatory protein pseudogene 1 Neighboring gene tubulin beta 8 class VIII pseudogene 1 Neighboring gene methylthioadenosine phosphorylase Neighboring gene uncharacterized LOC124902130 Neighboring gene cyclin dependent kinase inhibitor 2A Neighboring gene CDKN2B antisense RNA 1 Neighboring gene cyclin dependent kinase inhibitor 2B

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • CDKN2A antisense RNA 1 (head to head)
  • susceptibility protein NSG-x

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024274.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF211119, BX091351

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    21967139..21967754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    21981439..21982054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_016349.1: Suppressed sequence

    Description
    NM_016349.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.