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LINJ_32_2210 conserved hypothetical protein [ Leishmania infantum JPCM5 ]

Gene ID: 5071962, updated on 28-Dec-2023

Summary

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Gene symbol
LINJ_32_2210
Gene description
conserved hypothetical protein
Locus tag
LINJ_32_2210
Gene type
protein coding
RNA name
conserved hypothetical protein
RefSeq status
PROVISIONAL
Organism
Leishmania infantum JPCM5 (strain: JPCM5)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 32
Exon count:
1
Sequence:
Chromosome: 32; NC_009416.2 (812387..814015, complement)

Chromosome 32 - NC_009416.2Genomic Context describing neighboring genes Neighboring gene ABC transporter-like protein Neighboring gene conserved hypothetical protein Neighboring gene conserved hypothetical protein Neighboring gene conserved hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009416.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Peacock CS, et al. Nat Genet, 2007 Jul. PMID 17572675, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA-specific adenosine-34 deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble adenosine to inosine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
conserved hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009416.2 Reference assembly

    Range
    812387..814015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001467862.1 → XP_001467899.1  conserved hypothetical protein [Leishmania infantum JPCM5]

    See identical proteins and their annotated locations for XP_001467899.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2K4Z2Q7, A0A381MR29, A0A6L0XRY3, A4I830
    Conserved Domains (1) summary
    cl00269
    Location:468 → 530
    cytidine_deaminase-like; Cytidine and deoxycytidylate deaminase zinc-binding region. The family contains cytidine deaminases, nucleoside deaminases, deoxycytidylate deaminases and riboflavin deaminases. Also included are the apoBec family of mRNA editing enzymes. All members ...
Nucleotide Protein
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