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GSPATT00018178001 uncharacterized protein [ Paramecium tetraurelia ]

Gene ID: 5037043, updated on 23-Nov-2023

Summary

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Gene symbol
GSPATT00018178001
Gene description
uncharacterized protein
Locus tag
GSPATT00018178001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Paramecium tetraurelia (strain: Stock d4-2)
Lineage
Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium
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Genomic context

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Location:
chromosome: undetermined
Exon count:
7

NW_001799455.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001799455.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Aury JM, et al. Nature, 2006 Nov 9. PMID 17086204

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001799455.1 Reference assembly

    Range
    329382..330540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001451221.1 → XP_001451258.1  uncharacterized protein GSPATT00018178001 [Paramecium tetraurelia]

    See identical proteins and their annotated locations for XP_001451258.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0DLE4
    Conserved Domains (2) summary
    cd00047
    Location:77 → 325
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    pfam00102
    Location:76 → 329
    Y_phosphatase; Protein-tyrosine phosphatase
Nucleotide Protein
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