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DUXAP10 double homeobox A pseudogene 10 [ Homo sapiens (human) ]

Gene ID: 503639, updated on 23-Nov-2021

Summary

Official Symbol
DUXAP10provided by HGNC
Official Full Name
double homeobox A pseudogene 10provided by HGNC
Primary source
HGNC:HGNC:32189
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the DUXA homeobox gene family. [provided by RefSeq, Jul 2008]
Expression
Biased expression in prostate (RPKM 13.8), testis (RPKM 6.4) and 9 other tissues See more
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Genomic context

See DUXAP10 in Genome Data Viewer
Location:
14q11.2
Exon count:
8
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (19294785..19337674, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (19650032..19692921)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100420097 Neighboring gene LINC01297-DUXAP10-NBEAP6 readthrough Neighboring gene neurobeachin pseudogene 6 Neighboring gene TOMM40 pseudogene 1 Neighboring gene BMS1 pseudogene 17 Neighboring gene uncharacterized LOC105378174 Neighboring gene long intergenic non-protein coding RNA 1297 Neighboring gene GRAM domain containing 4 pseudogene 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110526.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK022914, AL589743, AL929602

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    19294785..19337674 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_004838.6: Suppressed sequence

    Description
    NG_004838.6: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
  2. NM_001013701.1: Suppressed sequence

    Description
    NM_001013701.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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