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DUXAP9 double homeobox A pseudogene 9 [ Homo sapiens (human) ]

Gene ID: 503638, updated on 16-Aug-2021

Summary

Official Symbol
DUXAP9provided by HGNC
Official Full Name
double homeobox A pseudogene 9provided by HGNC
Primary source
HGNC:HGNC:32188
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LNMAT1; LINC01296
Summary
Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the DUXA homeobox gene family. [provided by RefSeq, Jul 2008]
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Genomic context

See DUXAP9 in Genome Data Viewer
Location:
14q11.2
Exon count:
9
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (19062377..19107497)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (19880209..19925329, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene GRAM domain containing 4 pseudogene 4 Neighboring gene uncharacterized LOC105378171 Neighboring gene BMS1 pseudogene 18 Neighboring gene long noncoding RNA activated by TGF-beta Neighboring gene translocase of outer mitochondrial membrane 40 homolog (yeast) pseudogene Neighboring gene neurobeachin pseudogene 5

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • Lymph Node Metastasis Associated Transcript 1
  • lncRNA-CTD903
  • long intergenic non-protein coding RNA 1296

Clone Names

  • FLJ39632

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_122111.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AL589182
  2. NR_122112.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains four alternate internal exons and differs in the 3' terminal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AL589182

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    19062377..19107497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_004839.6: Suppressed sequence

    Description
    NG_004839.6: This RefSeq was removed because it is now thought that this gene is transcribed.
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