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DUXAP8 double homeobox A pseudogene 8 [ Homo sapiens (human) ]

Gene ID: 503637, updated on 13-May-2022

Summary

Official Symbol
DUXAP8provided by HGNC
Official Full Name
double homeobox A pseudogene 8provided by HGNC
Primary source
HGNC:HGNC:32187
See related
Ensembl:ENSG00000206195 AllianceGenome:HGNC:32187
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the DUXA homeobox gene family. [provided by RefSeq, Jul 2008]
Expression
Biased expression in prostate (RPKM 13.5), testis (RPKM 6.4) and 11 other tissues See more
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Genomic context

See DUXAP8 in Genome Data Viewer
Location:
22q11.1
Exon count:
8
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (15784954..15827434)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (16358848..16401349)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (16150529..16193009, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene POTEH antisense RNA 1 Neighboring gene POTE ankyrin domain family member H Neighboring gene RNA, U6 small nuclear 816, pseudogene Neighboring gene prostate enriched lncRNA Neighboring gene GRAM domain containing 4 pseudogene 2 Neighboring gene BMS1 pseudogene 22 Neighboring gene TOMM40 pseudogene 2 Neighboring gene neurobeachin pseudogene 3 Neighboring gene CMT1A duplicated region transcript 15 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_122113.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP000525, AP000527
    Related
    ENST00000413768.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    15784954..15827434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    16358848..16401349
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_004840.6: Suppressed sequence

    Description
    NG_004840.6: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.