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ClpR6 chloroplast Clp protease, subunit of ClpP peptidase complex [ Ostreococcus lucimarinus CCE9901 ]

Gene ID: 5003807, updated on 21-Dec-2023

Summary

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Gene symbol
ClpR6
Gene description
chloroplast Clp protease, subunit of ClpP peptidase complex
Locus tag
OSTLU_33566
Gene type
protein coding
RNA name
chloroplast Clp protease, subunit of ClpP peptidase complex
RefSeq status
PROVISIONAL
Organism
Ostreococcus lucimarinus CCE9901 (strain: CCE9901)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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Genomic context

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Location:
chromosome: 9
Exon count:
1
Sequence:
Chromosome: 9; NC_009363.1 (426915..427547, complement)

Chromosome 9 - NC_009363.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009363.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Palenik B, et al. Proc Natl Acad Sci U S A, 2007 May 1. PMID 17460045, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of endopeptidase Clp complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
chloroplast Clp protease, subunit of ClpP peptidase complex
XP_001419805.1
  • Clp protease, ClpP subcomplex, inactive subunit with structural role, chloroplast-targetted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009363.1 Reference assembly

    Range
    426915..427547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001419768.1 → XP_001419805.1  chloroplast Clp protease, subunit of ClpP peptidase complex [Ostreococcus lucimarinus CCE9901]

    See identical proteins and their annotated locations for XP_001419805.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A4S2U0
    Conserved Domains (1) summary
    cd07017
    Location:39 → 208
    S14_ClpP_2; Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease
Nucleotide Protein
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