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PAPPA-AS1 PAPPA antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 493913, updated on 22-Sep-2022

Summary

Official Symbol
PAPPA-AS1provided by HGNC
Official Full Name
PAPPA antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:35152
See related
Ensembl:ENSG00000256040 MIM:610689; AllianceGenome:HGNC:35152
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DIPAS; TAF4B; PAPPAS; TAF2C2; PAPPAAS; PAPPA-AS; TAFII105; NCRNA00156
Summary
Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See PAPPA-AS1 in Genome Data Viewer
Location:
9q33.1
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (116398157..116400606, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (128591160..128593610, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (119160436..119162885, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376236 Neighboring gene pappalysin 1 Neighboring gene PAPPA antisense RNA 2 Neighboring gene GATA motif-containing MPRA enhancer 254 Neighboring gene Sharpr-MPRA regulatory region 10185 Neighboring gene astrotactin 2 Neighboring gene ASTN2 antisense RNA 1

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • DIPLA1-antisense expressed
  • PAPPA antisense RNA 1 (non-protein coding)
  • PAPPA antisense RNA 1 (tail to tail)

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_103711.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AY623011
    Related
    ENST00000445861.3

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    116398157..116400606 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    128591160..128593610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)