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PICST_90238 Dolichyl-phosphate-mannose--protein mannosyltransferase 1 [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4840413, updated on 21-Dec-2023

Summary

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Gene symbol
PICST_90238
Gene description
Dolichyl-phosphate-mannose--protein mannosyltransferase 1
Locus tag
PICST_90238
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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Location:
chromosome: 6
Exon count:
2
Sequence:
Chromosome: 6; NC_009046.1 (1310674..1313697, complement)

Chromosome 6 - NC_009046.1Genomic Context describing neighboring genes Neighboring gene TFIID subunit Neighboring gene mRNA poyadenylation and turnover Neighboring gene Na+ ATPase Neighboring gene amidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009046.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Dolichyl-phosphate-mannose--protein mannosyltransferase 1
XP_001385948.2
  • go_component membrane
    go_function mannosyltransferase activity
    go_process O-linked glycosylation

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009046.1 Reference assembly

    Range
    1310674..1313697 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001385911.1 → XP_001385948.2  Dolichyl-phosphate-mannose--protein mannosyltransferase 1 [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001385948.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3LY52
    Conserved Domains (4) summary
    smart00472
    Location:402 → 459
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:39 → 748
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:66 → 309
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:546 → 742
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase
Nucleotide Protein
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