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TVAGG3_0975200 Chain S Ribosomal Protein S13p/s18e [ Trichomonas vaginalis G3 ]

Gene ID: 4769649, updated on 17-May-2024

Summary

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Gene symbol
TVAGG3_0975200
Gene description
Chain S Ribosomal Protein S13p/s18e
Locus tag
TVAGG3_0975200
See related
TrichDB:TVAGG3_0975200; VEuPathDB:TVAGG3_0975200
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
Lineage
Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
Old locus tag
TVAG_2v0975200
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Genomic context

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Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_067203.1 (12592688..12593244)

Chromosome I - NC_067203.1Genomic Context describing neighboring genes Neighboring gene protein transport to vacuole protein Neighboring gene hypothetical protein Neighboring gene protein CLEC16A family Neighboring gene long chain fatty acid--CoA ligase family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067203.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • replaces TrichDB:TVAG_487930

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Chain S Ribosomal Protein S13p/s18e
XP_001323914.1
  • eggNOG seed ortholog:5722.XP_001297089.1;replaces TrichDB:TVAG_487930

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_067203.1 Reference assembly

    Range
    12592688..12593244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001323879.2 → XP_001323914.1  Chain S Ribosomal Protein S13p/s18e [Trichomonas vaginalis G3]

    See identical proteins and their annotated locations for XP_001323914.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A2DTR8
    Conserved Domains (1) summary
    cl00331
    Location:1 → 154
    Ribosomal_S13; Ribosomal protein S13/S18
Nucleotide Protein
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