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TBC1D5 TBC1 domain family member 5 [ Pan troglodytes (chimpanzee) ]

Gene ID: 470764, updated on 17-Aug-2024

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Summary

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Official Symbol: TBC1D5provided by VGNC
Official Full Name: TBC1 domain family member 5provided by VGNC
Primary source: VGNC:VGNC:7130
Locus tag: CK820_G0008854
See related: Ensembl:ENSPTRG00000014676
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

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Location:: chromosome: 2

Exon count:: 30

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	2	NC_086015.1 (21147340..21731346, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	3	NC_072401.1 (21147005..21730962, complement)

Chromosome 2 - NC_086015.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

RH28491 (e-PCR)
- UniSTS:86791

WI-20516 (e-PCR)
- UniSTS:7974

G59347 (e-PCR)
- UniSTS:136512

RH80454 (e-PCR)
- UniSTS:86339

RH36248 (e-PCR)
- UniSTS:52300

RH25422 (e-PCR)
- UniSTS:58702

G59363 (e-PCR)
- UniSTS:136528

SHGC-106476 (e-PCR)
- UniSTS:169848

GDB:316005 (e-PCR)
- UniSTS:156561

RH125624 (e-PCR)
- UniSTS:163223

RH16587 (e-PCR)
- UniSTS:10173

SHGC-111540 (e-PCR)
- UniSTS:168387

SHGC-149202 (e-PCR)
- UniSTS:176858

A006M37 (e-PCR)
- UniSTS:36315

RH11669 (e-PCR)
- UniSTS:65511

RH45539 (e-PCR)
- UniSTS:36849

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables GTPase activator activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in activation of GTPase activity	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: TBC1 domain family member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

21147340..21731346 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_054680417.2 → XP_054536392.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_001161410.8 → XP_001161410.1 TBC1 domain family member 5 isoform X2

See identical proteins and their annotated locations for XP_001161410.1

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0

Related

ENSPTRP00000091526.1

Conserved Domains (1) summary

smart00164
Location:79 → 381

TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
XM_009444995.4 → XP_009443270.1 TBC1 domain family member 5 isoform X1

See identical proteins and their annotated locations for XP_009443270.1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58

Related

ENSPTRP00000065466.1

Conserved Domains (1) summary

smart00164
Location:79 → 381

TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
XM_054680416.2 → XP_054536391.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_054680411.2 → XP_054536386.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_063806651.1 → XP_063662721.1 TBC1 domain family member 5 isoform X4

UniProtKB/TrEMBL

A0A2J8NP90
XM_054680414.2 → XP_054536389.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_063806661.1 → XP_063662731.1 TBC1 domain family member 5 isoform X4

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806643.1 → XP_063662713.1 TBC1 domain family member 5 isoform X3

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806650.1 → XP_063662720.1 TBC1 domain family member 5 isoform X4

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806655.1 → XP_063662725.1 TBC1 domain family member 5 isoform X4

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806644.1 → XP_063662714.1 TBC1 domain family member 5 isoform X3

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806637.1 → XP_063662707.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_016940067.3 → XP_016795556.1 TBC1 domain family member 5 isoform X1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58

Conserved Domains (1) summary

smart00164
Location:79 → 381

TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
XM_063806652.1 → XP_063662722.1 TBC1 domain family member 5 isoform X4

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806645.1 → XP_063662715.1 TBC1 domain family member 5 isoform X3

UniProtKB/TrEMBL

A0A2J8NP90
XM_054680420.2 → XP_054536395.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_063806633.1 → XP_063662703.1 TBC1 domain family member 5 isoform X1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58
XM_063806654.1 → XP_063662724.1 TBC1 domain family member 5 isoform X4

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806656.1 → XP_063662726.1 TBC1 domain family member 5 isoform X4

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806657.1 → XP_063662727.1 TBC1 domain family member 5 isoform X4

UniProtKB/TrEMBL

A0A2J8NP90
XM_054680419.2 → XP_054536394.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_054680395.2 → XP_054536370.1 TBC1 domain family member 5 isoform X1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58
XM_063806653.1 → XP_063662723.1 TBC1 domain family member 5 isoform X4

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806632.1 → XP_063662702.1 TBC1 domain family member 5 isoform X1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58
XM_063806646.1 → XP_063662716.1 TBC1 domain family member 5 isoform X3

UniProtKB/TrEMBL

A0A2J8NP90
XM_009444996.4 → XP_009443271.1 TBC1 domain family member 5 isoform X1

See identical proteins and their annotated locations for XP_009443271.1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58

Conserved Domains (1) summary

smart00164
Location:79 → 381

TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
XM_063806638.1 → XP_063662708.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_054680401.2 → XP_054536376.1 TBC1 domain family member 5 isoform X1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58
XM_009444997.4 → XP_009443272.1 TBC1 domain family member 5 isoform X1

See identical proteins and their annotated locations for XP_009443272.1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58

Conserved Domains (1) summary

smart00164
Location:79 → 381

TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
XM_054680415.2 → XP_054536390.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_054680398.2 → XP_054536373.1 TBC1 domain family member 5 isoform X1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58
XM_063806635.1 → XP_063662705.1 TBC1 domain family member 5 isoform X1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58
XM_063806659.1 → XP_063662729.1 TBC1 domain family member 5 isoform X4

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806649.1 → XP_063662719.1 TBC1 domain family member 5 isoform X3

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806642.1 → XP_063662712.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_054680408.2 → XP_054536383.1 TBC1 domain family member 5 isoform X1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58
XM_054680396.2 → XP_054536371.1 TBC1 domain family member 5 isoform X1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58
XM_009444998.4 → XP_009443273.1 TBC1 domain family member 5 isoform X1

See identical proteins and their annotated locations for XP_009443273.1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58

Related

ENSPTRP00000087041.1

Conserved Domains (1) summary

smart00164
Location:79 → 381

TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
XM_063806658.1 → XP_063662728.1 TBC1 domain family member 5 isoform X4

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806640.1 → XP_063662710.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_009444999.5 → XP_009443274.1 TBC1 domain family member 5 isoform X1

See identical proteins and their annotated locations for XP_009443274.1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58

Conserved Domains (1) summary

smart00164
Location:79 → 381

TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
XM_063806660.1 → XP_063662730.1 TBC1 domain family member 5 isoform X4

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806648.1 → XP_063662718.1 TBC1 domain family member 5 isoform X3

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806641.1 → XP_063662711.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_063806634.1 → XP_063662704.1 TBC1 domain family member 5 isoform X1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58
XM_063806639.1 → XP_063662709.1 TBC1 domain family member 5 isoform X2

UniProtKB/TrEMBL

A0A2J8NP90, A0A2J8NP95, A0A6D2XQ72, K7D9X0
XM_063806647.1 → XP_063662717.1 TBC1 domain family member 5 isoform X3

UniProtKB/TrEMBL

A0A2J8NP90
XM_063806636.1 → XP_063662706.1 TBC1 domain family member 5 isoform X1

UniProtKB/TrEMBL

A0A2J8NP84, A0A2J8NP90, A0A6D2X7Y2, H2QM58
XM_016940073.4 → XP_016795562.1 TBC1 domain family member 5 isoform X3

UniProtKB/TrEMBL

A0A2J8NP90

Conserved Domains (1) summary

smart00164
Location:19 → 245

TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

Nucleotide		Protein
Heading	Accession and Version	Protein

Additional links

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Gene LinkOut

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Molecular Biology Databases

Bgee database

TBC1D5 gene expression

CTD: Comparative Toxicogenomics Database

CTD: Comparative Toxicogenomics Database - TBC1D5

Kyoto Encyclopedia of Genes and Genomes

Kyoto Encyclopedia of Genes and Genomes

OMA Browser: Orthologous MAtrix

OrthoDB catalog of orthologs

Orthologs

PANTHER Classification System

Gene Information

Research Materials

Addgene Non-profit plasmid repository

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GenScript latest version of gene cDNA ORF Clone

GenScript latest version of gene cDNA ORF Clone

OriGene

Order Tbc1d5 cDNA clone/Protein/Antibody/RNAi

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Supplemental Content

Table of contents

Summary
Genomic context
Genomic regions, transcripts, and products
Bibliography
General gene information
Markers, Homology, Gene Ontology
General protein information
NCBI Reference Sequences (RefSeq)
Related sequences
Additional links

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TBC1D5 TBC1 domain family member 5 [Pan troglodytes]
TBC1D5 TBC1 domain family member 5 [Pan troglodytes]
Gene ID:470764

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