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ACLA_015720 ubiquitin ligase subunit CulD, putative [ Aspergillus clavatus NRRL 1 ]

Gene ID: 4706926, updated on 28-Dec-2023

Summary

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Gene symbol
ACLA_015720
Gene description
ubiquitin ligase subunit CulD, putative
Locus tag
ACLA_015720
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus clavatus NRRL 1 (strain: NRRL 1, type-material: culture from type material of Aspergillus clavatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
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Genomic context

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Location:
chromosome: Unknown
Exon count:
3

NW_001517104.1Genomic Context describing neighboring genes Neighboring gene ataxia telangiectasia mutated (atm) Neighboring gene nuclear pore complex subunit Nup192, putative Neighboring gene dihydroxyacetone kinase (DakA), putative Neighboring gene small nuclear ribonucleoprotein SmD2, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001517104.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. Fedorova ND, et al. PLoS Genet, 2008 Apr 11. PMID 18404212, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin ligase subunit CulD, putative
XP_001274556.1
  • encoded by transcript ACLA_015720A
    predicted by EVM2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001517104.1 Reference assembly

    Range
    2056322..2059198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001274555.1 → XP_001274556.1  ubiquitin ligase subunit CulD, putative [Aspergillus clavatus NRRL 1]

    See identical proteins and their annotated locations for XP_001274556.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A1CBL2
    Conserved Domains (3) summary
    smart00182
    Location:573 → 735
    CULLIN; Cullin
    pfam00888
    Location:168 → 815
    Cullin; Cullin family
    pfam10557
    Location:850 → 908
    Cullin_Nedd8; Cullin protein neddylation domain
Nucleotide Protein
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