MYOG myogenin [Homo sapiens (human)] - Gene

Summary

Official Symbol: MYOGprovided by HGNC
Official Full Name: myogeninprovided by HGNC
Primary source: HGNC:HGNC:7612
See related: Ensembl:ENSG00000122180 MIM:159980
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: MYF4; myf-4; bHLHc3
Summary: Myogenin is a muscle-specific transcription factor that can induce myogenesis in a variety of cell types in tissue culture. It is a member of a large family of proteins related by sequence homology, the helix-loop-helix (HLH) proteins. It is essential for the development of functional skeletal muscle. [provided by RefSeq, Jul 2008]
Expression: Biased expression in prostate (RPKM 2.6) and esophagus (RPKM 0.9) See more
Orthologs: mouse all

Genomic context

Location:: 1q32.1

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
109.20191205	current	GRCh38.p13 (GCF_000001405.39)	1	NC_000001.11 (203083129..203086012, complement)
105	previous assembly	GRCh37.p13 (GCF_000001405.25)	1	NC_000001.10 (203052257..203055166, complement)

Chromosome 1 - NC_000001.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Among these targets, dehydrogenase/reductase member 2 DHRS2 and MYO1B were directly regulated by miR1453p in esophageal squamous cell carcinoma (ESCC) cells by dual luciferase reporter assays. Aberrantly expressed DHRS2 and MYOIB were detected in ESCC clinical specimens, and their overexpression enhanced cancer cell aggressiveness.
Title: Molecular pathogenesis of esophageal squamous cell carcinoma: Identification of the antitumor effects of miR‑145‑3p on gene regulation.
Findings indicate a interplay between A-kinase anchoring protein 6 (AKAP6) and myogenin.
Title: AKAP6 inhibition impairs myoblast differentiation and muscle regeneration: Positive loop between AKAP6 and myogenin.
results indicate that myogenin is a positive regulator in transcriptional regulation of MEGF10 in skeletal muscle
Title: Myogenin is a positive regulator of MEGF10 expression in skeletal muscle.
Sustained GSK3beta activity represses a critical regulatory step in the myogenic cascade, contributing to the undifferentiated, proliferative phenotype in alveolar rhabdomyosarcoma.
Title: Glycogen synthase kinase 3β represses MYOGENIN function in alveolar rhabdomyosarcoma.
Our study illustrates that focal myogenin immunoreactivity occurs uncommonly in fibroepithelial polyps of the lower female genital tract.
Title: Myogenin expression in vulvovaginal spindle cell lesions: analysis of a series of cases with an emphasis on diagnostic pitfalls.
Data indicate that muscle MYOG mRNA expression doubled, whereas MSTN protein expression decreased following immobilization.
Title: Muscle disuse atrophy is not accompanied by changes in skeletal muscle satellite cell content.
SREBP-1 regulate muscle protein synthesis through the downregulation of the expression of MYOD1, MYOG and MEF2C factors.
Title: SREBP-1 transcription factors regulate skeletal muscle cell size by controlling protein synthesis through myogenic regulatory factors.
the FACT complex promotes myogenin-dependent transcription
Title: Myogenin recruits the histone chaperone facilitates chromatin transcription (FACT) to promote nucleosome disassembly at muscle-specific genes.
Human muscle samples were analysed at different time-points post-denervation to evaluate changes in myogenin expression and their relationship with skeletal muscle atrophy.
Title: The study of myogenin expression in denervated human skeletal muscles.
After 2 years of denervation, expression of myogenin protein in myonuclei was decreased, but after 3 years of denervation, no expression of myogenin protein in myonuclei was found in denervated posterior cricoarytenoid muscles.
Title: [Correlation between myogenin and transforming growth factor-beta1 expression in long-term human denervated posterior cricoarytenoid muscles].

Submit: New GeneRIF Correction See all GeneRIFs (26)

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

G15880 (e-PCR)
- UniSTS:24835

SHGC-11939 (e-PCR)
- UniSTS:20748

STS-X17651 (e-PCR)
- UniSTS:62224

MYOG_8492 (e-PCR)
- UniSTS:467789

Homology

Homologs of the MYOG gene: The MYOG gene is conserved in Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, and frog.
Orthologs from Annotation Pipeline: 274 organisms have orthologs with human gene MYOG
Orthologs

Gene Ontology Provided by GOA

Function	Evidence Code	Pubs
DNA-binding transcription activator activity, RNA polymerase II-specific	IBA Inferred from Biological aspect of Ancestor more info	PubMed
DNA-binding transcription activator activity, RNA polymerase II-specific	IDA Inferred from Direct Assay more info	PubMed
DNA-binding transcription activator activity, RNA polymerase II-specific	TAS Traceable Author Statement more info	PubMed
DNA-binding transcription factor activity	ISS Inferred from Sequence or Structural Similarity more info
DNA-binding transcription factor activity, RNA polymerase II-specific	ISA Inferred from Sequence Alignment more info
DNA-binding transcription factor activity, RNA polymerase II-specific	ISM Inferred from Sequence Model more info	PubMed
DNA-binding transcription factor activity, RNA polymerase II-specific	NAS Non-traceable Author Statement more info	PubMed
E-box binding	ISS Inferred from Sequence or Structural Similarity more info
RNA polymerase II proximal promoter sequence-specific DNA binding	IBA Inferred from Biological aspect of Ancestor more info	PubMed
RNA polymerase II regulatory region sequence-specific DNA binding	IDA Inferred from Direct Assay more info	PubMed
RNA polymerase II regulatory region sequence-specific DNA binding	ISS Inferred from Sequence or Structural Similarity more info
chromatin DNA binding	ISS Inferred from Sequence or Structural Similarity more info
protein binding	IPI Inferred from Physical Interaction more info	PubMed
protein heterodimerization activity	ISS Inferred from Sequence or Structural Similarity more info
sequence-specific DNA binding	IDA Inferred from Direct Assay more info	PubMed

Process	Evidence Code	Pubs
cell cycle	IEA Inferred from Electronic Annotation more info
cellular response to estradiol stimulus	ISS Inferred from Sequence or Structural Similarity more info
cellular response to growth factor stimulus	IEA Inferred from Electronic Annotation more info
cellular response to lithium ion	IEA Inferred from Electronic Annotation more info
cellular response to magnetism	IEA Inferred from Electronic Annotation more info
cellular response to retinoic acid	IEA Inferred from Electronic Annotation more info
cellular response to tumor necrosis factor	IEA Inferred from Electronic Annotation more info
mRNA transcription by RNA polymerase II	TAS Traceable Author Statement more info	PubMed
muscle cell fate commitment	ISS Inferred from Sequence or Structural Similarity more info
myoblast differentiation	IEA Inferred from Electronic Annotation more info
negative regulation of cell proliferation	ISS Inferred from Sequence or Structural Similarity more info
negative regulation of glycolytic process	IEA Inferred from Electronic Annotation more info
ossification	IEA Inferred from Electronic Annotation more info
positive regulation of cell cycle arrest	ISS Inferred from Sequence or Structural Similarity more info
positive regulation of muscle atrophy	ISS Inferred from Sequence or Structural Similarity more info
positive regulation of muscle cell differentiation	TAS Traceable Author Statement more info
positive regulation of myoblast differentiation	IBA Inferred from Biological aspect of Ancestor more info	PubMed
positive regulation of myoblast differentiation	ISS Inferred from Sequence or Structural Similarity more info
positive regulation of myoblast fusion	IBA Inferred from Biological aspect of Ancestor more info	PubMed
positive regulation of myotube differentiation	ISS Inferred from Sequence or Structural Similarity more info
positive regulation of oxidative phosphorylation	IEA Inferred from Electronic Annotation more info
positive regulation of skeletal muscle fiber development	IBA Inferred from Biological aspect of Ancestor more info	PubMed
positive regulation of skeletal muscle fiber development	ISS Inferred from Sequence or Structural Similarity more info
positive regulation of transcription by RNA polymerase II	IBA Inferred from Biological aspect of Ancestor more info	PubMed
positive regulation of transcription by RNA polymerase II	IDA Inferred from Direct Assay more info	PubMed
positive regulation of transcription by RNA polymerase II	ISS Inferred from Sequence or Structural Similarity more info
regulation of myoblast fusion	ISS Inferred from Sequence or Structural Similarity more info
regulation of skeletal muscle satellite cell proliferation	ISS Inferred from Sequence or Structural Similarity more info
response to denervation involved in regulation of muscle adaptation	ISS Inferred from Sequence or Structural Similarity more info
response to electrical stimulus involved in regulation of muscle adaptation	ISS Inferred from Sequence or Structural Similarity more info
response to gravity	IEA Inferred from Electronic Annotation more info
response to muscle activity involved in regulation of muscle adaptation	ISS Inferred from Sequence or Structural Similarity more info
skeletal muscle atrophy	IEA Inferred from Electronic Annotation more info
skeletal muscle cell differentiation	IBA Inferred from Biological aspect of Ancestor more info	PubMed
skeletal muscle fiber development	IEA Inferred from Electronic Annotation more info
skeletal muscle tissue development	TAS Traceable Author Statement more info	PubMed
skeletal muscle tissue regeneration	IEA Inferred from Electronic Annotation more info
striated muscle atrophy	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
nuclear chromatin	ISA Inferred from Sequence Alignment more info
nucleoplasm	IDA Inferred from Direct Assay more info
nucleoplasm	TAS Traceable Author Statement more info
nucleus	IBA Inferred from Biological aspect of Ancestor more info	PubMed
nucleus	ISS Inferred from Sequence or Structural Similarity more info
protein-DNA complex	ISS Inferred from Sequence or Structural Similarity more info
transcription factor complex	ISS Inferred from Sequence or Structural Similarity more info

General protein information

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Preferred Names: myogenin

Names: class C basic helix-loop-helix protein 3; myogenic factor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.