U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NEIL2 nei like DNA glycosylase 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 463992, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
NEIL2provided by VGNC
Official Full Name
nei like DNA glycosylase 2provided by VGNC
Primary source
VGNC:VGNC:14547
Locus tag
CK820_G0040357
See related
Ensembl:ENSPTRG00000019995
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 7 NC_072405.2 (17762736..17780479)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (20905326..20923067)

Chromosome 7 - NC_072405.2Genomic Context describing neighboring genes Neighboring gene GATA binding protein 4 Neighboring gene putative uncharacterized protein C8orf49 Neighboring gene activated RNA polymerase II transcriptional coactivator p15-like Neighboring gene farnesyl-diphosphate farnesyltransferase 1 Neighboring gene cathepsin B

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-(apurinic or apyrimidinic site) endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
endonuclease 8-like 2
Names
nei endonuclease VIII-like 2
nei like 2
XP_001142056.1
XP_009438526.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    17762736..17780479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001142056.8 → XP_001142056.1  endonuclease 8-like 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8Q9A6
    Conserved Domains (3) summary
    cd08968
    Location:35 → 219
    MeNeil2_N; N-terminal domain of metazoan Nei-like glycosylase 2 (NEIL2)
    COG0266
    Location:189 → 354
    Nei; Formamidopyrimidine-DNA glycosylase [Replication, recombination and repair]
    pfam06831
    Location:254 → 300
    H2TH; Formamidopyrimidine-DNA glycosylase H2TH domain

  2. XM_009440251.5 → XP_009438526.1  endonuclease 8-like 2 isoform X2

    See identical proteins and their annotated locations for XP_009438526.1

    UniProtKB/TrEMBL
    A0A2J8Q9A6, H2R3T6
    Related
    ENSPTRP00000046049.5
    Conserved Domains (3) summary
    cd08968
    Location:1 → 185
    MeNeil2_N; N-terminal domain of metazoan Nei-like glycosylase 2 (NEIL2)
    COG0266
    Location:155 → 320
    Nei; Formamidopyrimidine-DNA glycosylase [Replication, recombination and repair]
    pfam06831
    Location:220 → 266
    H2TH; Formamidopyrimidine-DNA glycosylase H2TH domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials