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MEF2D myocyte enhancer factor 2D [ Pan troglodytes (chimpanzee) ]

Gene ID: 457396, updated on 2-Nov-2023

Summary

Official Symbol
MEF2Dprovided by VGNC
Official Full Name
myocyte enhancer factor 2Dprovided by VGNC
Primary source
VGNC:VGNC:1316
Locus tag
CK820_G0041313
See related
Ensembl:ENSPTRG00000001460
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See MEF2D in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (138616434..138654123, complement)

Chromosome 1 - NC_072398.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129144410 Neighboring gene Rh family B glycoprotein Neighboring gene uncharacterized LOC101058422 Neighboring gene microRNA mir-9-1 Neighboring gene U4 spliceosomal RNA Neighboring gene small nucleolar RNA U13 Neighboring gene IQ motif containing GTPase activating protein 3 Neighboring gene tetratricopeptide repeat domain 24

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072398.1 Chromosome 1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General gene information

Markers

General protein information

Preferred Names
myocyte-specific enhancer factor 2D
Names
MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072398.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    138616434..138654123 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009434442.4XP_009432717.1  myocyte-specific enhancer factor 2D isoform X2

    See identical proteins and their annotated locations for XP_009432717.1

    UniProtKB/TrEMBL
    A0A2I3S4K5
    Conserved Domains (3) summary
    COG5068
    Location:1260
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:104150
    HJURP_C; Holliday junction regulator protein family C-terminal repeat
  2. XM_016929173.2XP_016784662.1  myocyte-specific enhancer factor 2D isoform X5

    UniProtKB/TrEMBL
    A0A2I3S4K5
  3. XM_009434456.3XP_009432731.1  myocyte-specific enhancer factor 2D isoform X4

    See identical proteins and their annotated locations for XP_009432731.1

    UniProtKB/TrEMBL
    A0A2I3S4K5, A0A2I3SA27, A0A2J8K5C2, A0A6D2XUC4
    Related
    ENSPTRP00000073835.1
    Conserved Domains (3) summary
    COG5068
    Location:1260
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:104150
    HJURP_C; Holliday junction regulator protein family C-terminal repeat
  4. XM_016929143.2XP_016784632.1  myocyte-specific enhancer factor 2D isoform X1

    UniProtKB/TrEMBL
    A0A2I3S4K5, A0A2I3SAX9, A0A2J8K5D7, A0A6D2Y728
    Conserved Domains (2) summary
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:97151
    HJURP_C; Holliday junction regulator protein family C-terminal repeat
  5. XM_016929157.2XP_016784646.1  myocyte-specific enhancer factor 2D isoform X3

    UniProtKB/TrEMBL
    A0A2I3S4K5, A0A2J8K5B5, A0A6D2WBA0, H2R268, K7CMA0
    Related
    ENSPTRP00000043478.4
    Conserved Domains (2) summary
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:97151
    HJURP_C; Holliday junction regulator protein family C-terminal repeat
  6. XM_001165500.6XP_001165500.1  myocyte-specific enhancer factor 2D isoform X1

    See identical proteins and their annotated locations for XP_001165500.1

    UniProtKB/TrEMBL
    A0A2I3S4K5, A0A2I3SAX9, A0A2J8K5D7, A0A6D2Y728
    Conserved Domains (2) summary
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:97151
    HJURP_C; Holliday junction regulator protein family C-terminal repeat
  7. XM_016929122.2XP_016784611.1  myocyte-specific enhancer factor 2D isoform X1

    UniProtKB/TrEMBL
    A0A2I3S4K5, A0A2I3SAX9, A0A2J8K5D7, A0A6D2Y728
    Conserved Domains (2) summary
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:97151
    HJURP_C; Holliday junction regulator protein family C-terminal repeat
  8. XM_016929127.3XP_016784616.1  myocyte-specific enhancer factor 2D isoform X1

    UniProtKB/TrEMBL
    A0A2I3S4K5, A0A2I3SAX9, A0A2J8K5D7, A0A6D2Y728
    Conserved Domains (2) summary
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:97151
    HJURP_C; Holliday junction regulator protein family C-terminal repeat