U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PYGM glycogen phosphorylase, muscle associated [ Pan troglodytes (chimpanzee) ]

Gene ID: 451299, updated on 29-Mar-2024

Summary

Official Symbol
PYGMprovided by VGNC
Official Full Name
glycogen phosphorylase, muscle associatedprovided by VGNC
Primary source
VGNC:VGNC:57279
Locus tag
CK820_G0034008
See related
Ensembl:ENSPTRG00000003845
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See PYGM in Genome Data Viewer
Location:
chromosome: 11
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (67065802..67079478, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (66176563..66190247, complement)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene neurexin 2 Neighboring gene uncharacterized LOC107967113 Neighboring gene RAS guanyl releasing protein 2 Neighboring gene splicing factor 1 Neighboring gene mitogen-activated protein kinase kinase kinase kinase 2

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen phosphorylase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
glycogen phosphorylase, muscle form
Names
phosphorylase, glycogen, muscle
phosphorylase, glycogen; muscle (McArdle syndrome, glycogen storage disease type V)
XP_009421690.2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    67065802..67079478 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009423415.5XP_009421690.2  glycogen phosphorylase, muscle form

    UniProtKB/TrEMBL
    A0A2I3S7B5, A0A2J8QCN7, A0A6D2XIJ2, H2Q405, K6ZQR0
    Related
    ENSPTRP00000006629.4
    Conserved Domains (1) summary
    cd04300
    Location:29828
    GT1_Glycogen_Phosphorylase; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of ...