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myl12b myosin light chain 12B [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 448060, updated on 17-Aug-2024

Summary

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Official Symbol
myl12bprovided by Xenbase
Official Full Name
myosin light chain 12Bprovided by Xenbase
Primary source
Xenbase:XB-GENE-991019
See related
Ensembl:ENSXETG00000025009
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
mlc-b; mrlc2; mrlcb
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Genomic context

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Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (106942210..106958640, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (91864404..91880718, complement)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene discs, large homolog-associated protein 1 Neighboring gene uncharacterized LOC105947633 Neighboring gene uncharacterized LOC108647918 Neighboring gene TGFB induced factor homeobox 1 Neighboring gene myomesin 1 Neighboring gene lipin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC69457

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
myosin light chain 12B
Names
myosin regulatory light chain MRLC2
myosin, light chain 12B, regulatory

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001004813.1 → NP_001004813.1  myosin light chain 12B

    See identical proteins and their annotated locations for NP_001004813.1

    Status: PROVISIONAL

    Source sequence(s)
    BC074583
    UniProtKB/TrEMBL
    F6UGL2, Q6GLB7
    Related
    ENSXETP00000053699.3, ENSXETT00000053699.4
    Conserved Domains (1) summary
    COG5126
    Location:19 → 169
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    106942210..106958640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012964507.2 → XP_012819961.1  myosin light chain 12B isoform X1

    See identical proteins and their annotated locations for XP_012819961.1

    UniProtKB/TrEMBL
    F6UGL2, Q28IZ4
    Conserved Domains (1) summary
    COG5126
    Location:19 → 169
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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