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POTEE POTE ankyrin domain family member E [ Homo sapiens (human) ]

Gene ID: 445582, updated on 3-Nov-2024

Summary

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Official Symbol
POTEEprovided by HGNC
Official Full Name
POTE ankyrin domain family member Eprovided by HGNC
Primary source
HGNC:HGNC:33895
See related
Ensembl:ENSG00000188219 MIM:608914; AllianceGenome:HGNC:33895
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
A26C1; POTE2; A26C1A; POTE-2; CT104.2; POTE2gamma
Summary
Predicted to enable protein kinase binding activity. Predicted to be a structural constituent of postsynaptic actin cytoskeleton. Involved in substantia nigra development. Located in blood microparticle and extracellular exosome. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in appendix (RPKM 3.7), lymph node (RPKM 3.5) and 24 other tissues See more
Orthologs
all
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Genomic context

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See POTEE in Genome Data Viewer
Location:
2q21.1
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (131209536..131265278)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (131643505..131702729)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (131967109..132022851)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene neurofibromin 1 pseudogene 8 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:131958317-131958818 Neighboring gene mediator complex subunit 15 pseudogene 8 Neighboring gene RNA, U6 small nuclear 127, pseudogene Neighboring gene uncharacterized LOC440910 Neighboring gene LCR2q21.1 distal recombination region Neighboring gene cytochrome P450 family 4 subfamily F member 31, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:132056470-132056971 Neighboring gene fatty acyl-CoA reductase 2 pseudogene 4 Neighboring gene Kruppel like factor 2 pseudogene 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Identification of MΦ specific POTEE expression: Its role in mTORC2 activation via protein-protein interaction in TAMs. Vekariya U, et al. Cell Immunol, 2019 Jan. PMID 30420269
  2. POTEE promotes colorectal carcinoma progression via activating the Rac1/Cdc42 pathway. Xu Q, et al. Exp Cell Res, 2020 May 1. PMID 32142855
  3. Selective POTE paralogs on chromosome 2 are expressed in human embryonic stem cells. Bera TK, et al. Stem Cells Dev, 2008 Apr. PMID 18447647, Free PMC Article
  4. A primate-specific POTE-actin fusion protein plays a role in apoptosis. Liu XF, et al. Apoptosis, 2009 Oct. PMID 19669888, Free PMC Article
  5. POTEE stimulates the proliferation of pancreatic cancer by activating the PI3K/Akt/GSK-3β/β-catenin signaling. Hao Q, et al. Biofactors, 2020 Jul. PMID 32589786

See all (62) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. POTEE stimulates the proliferation of pancreatic cancer by activating the PI3K/Akt/GSK-3beta/beta-catenin signaling.
    Title: POTEE stimulates the proliferation of pancreatic cancer by activating the PI3K/Akt/GSK-3β/β-catenin signaling.
  2. POTEE promotes colorectal carcinoma progression via activating the Rac1/Cdc42 pathway.
    Title: POTEE promotes colorectal carcinoma progression via activating the Rac1/Cdc42 pathway.
  3. POTEE drives colorectal cancer development via regulating SPHK1/p65 signaling.
    Title: POTEE drives colorectal cancer development via regulating SPHK1/p65 signaling.
  4. In TAMs, POTEE was involved differential protein-protein interaction with mTOR, RICTOR, and Rad51 indicating its biological role in cell invasion through mTORC2 activation.
    Title: Identification of MΦ specific POTEE expression: Its role in mTORC2 activation via protein-protein interaction in TAMs.
  5. POTEE interaction with HIV-1 Nef regulates mTORC2 activation in macrophages.
    Title: HIV-1 Nef-POTEE; A novel interaction modulates macrophage dissemination via mTORC2 signaling pathway.
  6. Data show that HPX, POTEE and ApoA1 are deregulated in breast tumors suggesting un important role in breast tumorigenesis.
    Title: Identification of ApoA1, HPX and POTEE genes by omic analysis in breast cancer.
  7. POTE gene family encodes a new family of proapoptotic proteins.
    Title: A primate-specific POTE-actin fusion protein plays a role in apoptosis.
  8. The POTE paralogs that are expressed in ES cells may have a specific function during lineage-specific differentiation of ES cells.
    Title: Selective POTE paralogs on chromosome 2 are expressed in human embryonic stem cells.
Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of postsynaptic actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in axonogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in cell motility IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in postsynaptic actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
  
involved_in substantia nigra development HEP PubMed 
Component Evidence Code Pubs
part_of NuA4 histone acetyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in actin filament IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in axon IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in blood microparticle HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in extracellular exosome HDA PubMed 
located_in extracellular space HDA PubMed 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in synapse IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
POTE ankyrin domain family member E
Names
ANKRD26-like family C member 1A
cancer/testis antigen family 104, member 2
prostate, ovary, testis-expressed protein on chromosome 2
protein expressed in prostate, ovary, testis, and placenta 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001083538.3 → NP_001077007.1  POTE ankyrin domain family member E

    See identical proteins and their annotated locations for NP_001077007.1

    Status: VALIDATED

    Source sequence(s)
    AC131180
    Consensus CDS
    CCDS46414.1
    UniProtKB/Swiss-Prot
    Q6S8J3, Q6S8J4, Q6S8J5, Q6S8J8
    Related
    ENSP00000507284.1, ENST00000683005.1
    Conserved Domains (6) summary
    smart00268
    Location:705 → 1075
    ACTIN; Actin
    cd00204
    Location:167 → 292
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:177 → 269
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:143 → 193
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:238 → 269
    ANK; ANK repeat [structural motif]
    cl17037
    Location:701 → 1075
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    131209536..131265278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047444418.1 → XP_047300374.1  POTE ankyrin domain family member E isoform X1

  2. XM_047444421.1 → XP_047300377.1  POTE ankyrin domain family member E isoform X4

    UniProtKB/Swiss-Prot
    Q6S8J3, Q6S8J4, Q6S8J5, Q6S8J8
    Related
    ENSP00000439189.1, ENST00000356920.9

  3. XM_047444419.1 → XP_047300375.1  POTE ankyrin domain family member E isoform X2

  4. XM_047444420.1 → XP_047300376.1  POTE ankyrin domain family member E isoform X3

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    131643505..131702729
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054342144.1 → XP_054198119.1  POTE ankyrin domain family member E isoform X4

  2. XM_054342142.1 → XP_054198117.1  POTE ankyrin domain family member E isoform X2

  3. XM_054342143.1 → XP_054198118.1  POTE ankyrin domain family member E isoform X3

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001004054.2: Suppressed sequence

    Description
    NM_001004054.2: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.

  2. NM_001005359.1: Suppressed sequence

    Description
    NM_001005359.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.

  3. NM_001005364.1: Suppressed sequence

    Description
    NM_001005364.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6S8J3.3 GenPept UniProtKB/Swiss-Prot:Q6S8J3

Gene LinkOut

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