U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

D130007C19Rik RIKEN cDNA D130007C19 gene [ Mus musculus (house mouse) ]

Gene ID: 442805, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
D130007C19Rikprovided by MGI
Official Full Name
RIKEN cDNA D130007C19 geneprovided by MGI
Primary source
MGI:MGI:3045257
See related
AllianceGenome:MGI:3045257
Gene type
unknown
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Ubiquitous expression in testis adult (RPKM 3.4), whole brain E14.5 (RPKM 1.0) and 26 other tissues See more

Genomic context

Go to the top of the page Help
See D130007C19Rik in Genome Data Viewer
Location:
4 D2.2; 4 57.42 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (123785865..123811062, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (123902074..123917449, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene Riken cDNA 4933427I04 gene Neighboring gene predicted gene, 31309 Neighboring gene STARR-positive B cell enhancer ABC_E2120 Neighboring gene STARR-positive B cell enhancer ABC_E11255 Neighboring gene MYC binding protein Neighboring gene Ras-related GTP binding C Neighboring gene STARR-seq mESC enhancer starr_11317 Neighboring gene predicted gene, 40241

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A CRISPR-based screen for Hedgehog signaling provides insights into ciliary function and ciliopathies. Breslow DK, et al. Nat Genet, 2018 Mar. PMID 29459677, Free PMC Article
  2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  4. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    123785865..123811062 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004942183.1 RNA Sequence

  2. XR_004942182.1 RNA Sequence

  3. XR_376626.4 RNA Sequence

  4. XR_004942184.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001002773.1: Suppressed sequence

    Description
    NM_001002773.1: This RefSeq was suppressed because the predicted protein product was not well-supported.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.