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A830005F24Rik RIKEN cDNA A830005F24 gene [ Mus musculus (house mouse) ]

Gene ID: 442803, updated on 30-Apr-2024

Summary

Official Symbol
A830005F24Rikprovided by MGI
Official Full Name
RIKEN cDNA A830005F24 geneprovided by MGI
Primary source
MGI:MGI:3045249
See related
Ensembl:ENSMUSG00000053181 AllianceGenome:MGI:3045249
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Is expressed in ductus deferens; epididymis; ileum; midbrain; and testis. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

See A830005F24Rik in Genome Data Viewer
Location:
13 A5; 13 24.83 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (48667046..48668315)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (48513570..48514839)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 40940 Neighboring gene zinc finger protein 169 Neighboring gene predicted gene, 36402 Neighboring gene STARR-positive B cell enhancer ABC_E7235 Neighboring gene STARR-positive B cell enhancer ABC_E5394 Neighboring gene RIKEN cDNA 6720427I07 gene Neighboring gene microRNA let7f-1 Neighboring gene microRNA let7d

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_165458.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC147162
    Related
    ENSMUST00000065465.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    48667046..48668315
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001002771.1: Suppressed sequence

    Description
    NM_001002771.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.