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ANKRD18B ankyrin repeat domain 18B [ Homo sapiens (human) ]

Gene ID: 441459, updated on 20-Feb-2017
Official Symbol
ANKRD18Bprovided by HGNC
Official Full Name
ankyrin repeat domain 18Bprovided by HGNC
Primary source
HGNC:HGNC:23644
See related
Ensembl:ENSG00000230453 Vega:OTTHUMG00000019776
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
bA255A11.3; bA255A11.5
Orthologs
Location:
9p13.3
Exon count:
22
Annotation release Status Assembly Chr Location
108 current GRCh38.p7 (GCF_000001405.33) 9 NC_000009.12 (33524403..33578755)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (33524347..33602658)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107987019 Neighboring gene vomeronasal 1 receptor 47 pseudogene Neighboring gene melanoma antigen pseudogene Neighboring gene sorting nexin 18 pseudogene 7 Neighboring gene cytochrome P450 family 4 subfamily F member 26, pseudogene Neighboring gene protease, serine 3 pseudogene 4

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Related articles in PubMed

Preferred Names
ankyrin repeat domain-containing protein 18B

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001244752.1NP_001231681.1  ankyrin repeat domain-containing protein 18B

    Status: PROVISIONAL

    Source sequence(s)
    AL139008, BC009440, BF103989, DB512460, DW421358, DW441346
    Related
    ENSP00000290943, OTTHUMP00000195020, ENST00000290943, OTTHUMT00000313729
    Conserved Domains (6) summary
    cd00204
    Location:62187
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12001
    Location:873977
    DUF3496; Domain of unknown function (DUF3496)
    pfam12796
    Location:72164
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:3888
    Ank_4; Ankyrin repeats (many copies)
    pfam14915
    Location:335625
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:6998
    ANK; ANK repeat [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p7 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p7 Primary Assembly

    Range
    33524403..33578755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011517881.2XP_011516183.1  ankyrin repeat domain-containing protein 18B isoform X1

    Conserved Domains (7) summary
    cd00204
    Location:62187
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12001
    Location:892996
    DUF3496; Domain of unknown function (DUF3496)
    pfam12796
    Location:72164
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:3888
    Ank_4; Ankyrin repeats (many copies)
    pfam14915
    Location:354644
    CCDC144C; CCDC144C protein coiled-coil region
    pfam16043
    Location:769914
    DUF4795; Domain of unknown function (DUF4795)
    sd00045
    Location:6998
    ANK; ANK repeat [structural motif]
  2. XM_011517883.2XP_011516185.1  ankyrin repeat domain-containing protein 18B isoform X2

    Conserved Domains (7) summary
    cd00204
    Location:62187
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12001
    Location:873977
    DUF3496; Domain of unknown function (DUF3496)
    pfam12796
    Location:72164
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:3888
    Ank_4; Ankyrin repeats (many copies)
    pfam14915
    Location:335625
    CCDC144C; CCDC144C protein coiled-coil region
    pfam16043
    Location:750895
    DUF4795; Domain of unknown function (DUF4795)
    sd00045
    Location:6998
    ANK; ANK repeat [structural motif]
  3. XM_011517885.2XP_011516187.1  ankyrin repeat domain-containing protein 18B isoform X3

    Conserved Domains (3) summary
    pfam12001
    Location:610714
    DUF3496; Domain of unknown function (DUF3496)
    pfam14915
    Location:72362
    CCDC144C; CCDC144C protein coiled-coil region
    pfam16043
    Location:487617
    DUF4795; Domain of unknown function (DUF4795)
  4. XM_017014728.1XP_016870217.1  ankyrin repeat domain-containing protein 18B isoform X4

Alternate CHM1_1.1

Genomic

  1. NC_018920.2 Alternate CHM1_1.1

    Range
    33524169..33572758
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001013728.1: Suppressed sequence

    Description
    NM_001013728.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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