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PMS2CL PMS2 C-terminal like pseudogene [ Homo sapiens (human) ]

Gene ID: 441194, updated on 13-May-2022

Summary

Official Symbol
PMS2CLprovided by HGNC
Official Full Name
PMS2 C-terminal like pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:30061
See related
Ensembl:ENSG00000187953 AllianceGenome:HGNC:30061
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PMS2P13
Expression
Ubiquitous expression in testis (RPKM 8.4), brain (RPKM 7.3) and 25 other tissues See more
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Genomic context

See PMS2CL in Genome Data Viewer
Location:
7p22.1
Exon count:
6
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (6735305..6751601)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (6854400..6870733)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (6774936..6791232)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene zinc finger protein 12 Neighboring gene speedy/RINGO cell cycle regulator family member E20, pseudogene Neighboring gene radial spoke head 10 homolog B2 Neighboring gene CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
EBI GWAS Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • PMS1 homolog 2, mismatch repair system component pseudogene 13
  • postmeiotic segregation increased 2 pseudogene 13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002217.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AB116525
    Related
    ENST00000403974.6

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    6735305..6751601
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    6854400..6870733
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)