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EIF1B-AS1 EIF1B antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 440952, updated on 10-Oct-2023

Summary

Official Symbol
EIF1B-AS1provided by HGNC
Official Full Name
EIF1B antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:44555
See related
Ensembl:ENSG00000280739 AllianceGenome:HGNC:44555
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See EIF1B-AS1 in Genome Data Viewer
Location:
3p22.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (40173145..40309698, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (40187067..40324746, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (40214636..40351189, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene myosin VIIA and Rab interacting protein Neighboring gene RNA, U4 small nuclear 56, pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr3:40063846-40064360 Neighboring gene uncharacterized LOC124909367 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:40175064-40176263 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19709 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19710 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19711 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19712 Neighboring gene RNA, 7SL, cytoplasmic 411, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19713 Neighboring gene small nucleolar RNA SNORA64/SNORA10 family Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:40332291-40332837 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:40342216-40343415 Neighboring gene uncharacterized LOC124906228 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19714 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14230 Neighboring gene Sharpr-MPRA regulatory region 12551 Neighboring gene phosphoglycerate mutase 1 pseudogene 3 Neighboring gene eukaryotic translation initiation factor 1B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Clone Names

  • FLJ33065

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033965.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC099557, AC104186, AK309874, BC045736
    Related
    ENST00000625390.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    40173145..40309698 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    40187067..40324746 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)