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SLC22A20P solute carrier family 22 member 20, pseudogene [ Homo sapiens (human) ]

Gene ID: 440044, updated on 23-Nov-2021

Summary

Official Symbol
SLC22A20Pprovided by HGNC
Official Full Name
solute carrier family 22 member 20, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:29867
See related
Ensembl:ENSG00000197847 MIM:611696
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Oat6; SLC22A20
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See SLC22A20P in Genome Data Viewer
Location:
11q13.1
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (65213840..65242757)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (64981311..65010228)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene phosphoglycerate mutase 1 pseudogene 8 Neighboring gene uncharacterized LOC728975 Neighboring gene calpain 1 Neighboring gene DNA polymerase alpha 2, accessory subunit Neighboring gene uncharacterized LOC105369344 Neighboring gene CDC42 effector protein 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Other Names

  • organic anion transporter 6
  • solute carrier family 22, member 20

Clone Names

  • FLJ16331, FLJ37246

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in ion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033396.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK131327, AP000828, BM826695, DN831898, DY654625, DY654969
    Related
    ENST00000529062.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    65213840..65242757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001004326.4: Suppressed sequence

    Description
    NM_001004326.4: This RefSeq has been removed because it is now thought that this gene is a lineage-specific pseudogene.
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