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KRTAP5-5 keratin associated protein 5-5 [ Homo sapiens (human) ]

Gene ID: 439915, updated on 8-Nov-2023

Summary

Official Symbol
KRTAP5-5provided by HGNC
Official Full Name
keratin associated protein 5-5provided by HGNC
Primary source
HGNC:HGNC:23601
See related
Ensembl:ENSG00000185940 AllianceGenome:HGNC:23601
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
KRTAP5.5; KRTAP5-11
Summary
Predicted to act upstream of or within hematopoietic progenitor cell differentiation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See KRTAP5-5 in Genome Data Viewer
Location:
11p15.5
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (1629775..1630930)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (1711076..1714900)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (1651005..1652160)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene keratin associated protein 5-3 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr11:1640412-1641611 Neighboring gene keratin associated protein 5-4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:1653741-1654240 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:1676043-1676647 Neighboring gene uncharacterized LOC124902609 Neighboring gene family with sequence similarity 99 member A

Genomic regions, transcripts, and products

General protein information

Preferred Names
keratin-associated protein 5-5
Names
keratin associated protein 5-11
keratin-associated protein 5.11
keratin-associated protein 5.5
ultrahigh sulfur keratin-associated protein 5.5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001480.3NP_001001480.2  keratin-associated protein 5-5

    See identical proteins and their annotated locations for NP_001001480.2

    Status: VALIDATED

    Source sequence(s)
    AP006285
    Consensus CDS
    CCDS41592.1
    UniProtKB/Swiss-Prot
    A8MWN2, Q701N2
    Related
    ENSP00000382584.2, ENST00000399676.4
    Conserved Domains (1) summary
    pfam13885
    Location:183234
    Keratin_B2_2; Keratin, high sulfur B2 protein

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    1629775..1630930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791792.1 Reference GRCh38.p14 PATCHES

    Range
    369751..370906
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187584.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    112012..113167
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_187657.1 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    105784..107618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006725534.3XP_006725597.1  keratin-associated protein 5-5 isoform X1

    See identical proteins and their annotated locations for XP_006725597.1

    UniProtKB/TrEMBL
    A0A0G2JS28

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    1711076..1714900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047445875.1XP_047301831.1  keratin-associated protein 5-5 isoform X1

    UniProtKB/TrEMBL
    A0A0G2JS28