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TB927.1.3950 alanine aminotransferase, putative [ Trypanosoma brucei brucei TREU927 ]

Gene ID: 4357469, updated on 4-Jan-2024

Summary

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Gene symbol
TB927.1.3950
Gene description
alanine aminotransferase, putative
Locus tag
TB927.1.3950
Gene type
protein coding
RNA name
alanine aminotransferase, putative
RefSeq status
PROVISIONAL
Organism
Trypanosoma brucei brucei TREU927 (isolate: 927/4 GUTat10.1, sub-species: brucei)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma
Old locus tag
Tb927.1.3950
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_008409.1 (840682..842391)

Chromosome 1 - NC_008409.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein, unlikely Neighboring gene hypothetical protein Neighboring gene hypothetical protein, unlikely Neighboring gene hypothetical protein, unlikely

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_008409.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional characterization of stage-specific aminotransferases from trypanosomatids. Marciano D, et al. Mol Biochem Parasitol, 2009 Aug. PMID 19443056
  2. The DNA sequence of chromosome I of an African trypanosome: gene content, chromosome organisation, recombination and polymorphism. Hall N, et al. Nucleic Acids Res, 2003 Aug 15. PMID 12907729, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. ALAT localize in the cytosol and in the mitochondrion.
    Title: Functional characterization of stage-specific aminotransferases from trypanosomatids.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-alanine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanine aminotransferase, putative
XP_001219089.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_008409.1 Reference assembly

    Range
    840682..842391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001219088.1 → XP_001219089.1  alanine aminotransferase, putative [Trypanosoma brucei brucei TREU927]

    See identical proteins and their annotated locations for XP_001219089.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3L6LFK8, Q4GYI2
    Conserved Domains (2) summary
    cd00609
    Location:166 → 559
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PTZ00377
    Location:78 → 569
    PTZ00377; alanine aminotransferase; Provisional
Nucleotide Protein
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