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LOC4347877 arogenate dehydratase 3 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4347877, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4347877
Gene description
arogenate dehydratase 3
Locus tag
OSNPB_090566050
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1155_H10.7
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Genomic context

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Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (27009056..27010712)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (22563885..22565638)

Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene arogenate dehydratase 3 Neighboring gene uncharacterized LOC4347876 Neighboring gene polyadenylation and cleavage factor homolog 4 Neighboring gene uncharacterized LOC107278876

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Nucleotide-Dependent Interactome of Rice Heterotrimeric G-Protein α -Subunit. Biswal AK, et al. Proteomics, 2019 May. PMID 30866160

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arogenate dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables prephenate dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-phenylalanine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arogenate dehydratase 3
Names
OSJNBa0070E11.16
Os09g0566050
putative prephenate dehydratase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

    Range
    27009056..27010712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015756120.3 → XP_015611606.1  arogenate dehydratase 3

    UniProtKB/TrEMBL
    A2Z456, Q650V6, Q652N0
    Conserved Domains (1) summary
    PLN02317
    Location:6 → 392
    PLN02317; arogenate dehydratase
Nucleotide Protein
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