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LOC4331112 glutathione reductase, cytosolic-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4331112, updated on 16-Jul-2024

Summary

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Gene symbol
LOC4331112
Gene description
glutathione reductase, cytosolic-like
Locus tag
OSNPB_020813500
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
GR; GRC2; GRase; RGRC2; OsJ_08842; OJ1293_E04.4-1
Expression
Ubiquitous expression in leaves after flowering (RPKM 111.5), roots after flowering (RPKM 93.8) and 6 other tissues See more
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Genomic context

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Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (35336150..35342205)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (34837744..34843836)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene F-box protein PP2-B10 Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene 3-ketoacyl-CoA synthase 12 Neighboring gene uncharacterized LOC112937871

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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Related articles in PubMed

  1. Gene cloning and expression of cytosolic glutathione reductase in rice (Oryza sativa L.). Kaminaka H, et al. Plant Cell Physiol, 1998 Dec. PMID 10050312
  2. Expression of ascorbate peroxidase and glutathione reductase in roots of rice seedlings in response to NaCl and H2O2. Tsai YC, et al. J Plant Physiol, 2005 Mar. PMID 15832681
  3. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
  4. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Exogenously applied H2O2 enhanced the activity and expression of glutathione reductase.
    Title: Expression of ascorbate peroxidase and glutathione reductase in roots of rice seedlings in response to NaCl and H2O2.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutathione-disulfide reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell redox homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glutathione metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutathione reductase, cytosolic
Names
LOC_Os02g56850
OSJNBa0053L11.26-1
cytosolic glutathione reductase
NP_001388926.1
NP_001388927.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001401997.1 → NP_001388926.1  glutathione reductase, cytosolic

    Status: VALIDATED

    Source sequence(s)
    AK058270, CI749662, D85751
    UniProtKB/Swiss-Prot
    A0A0P0VR51, P48642, Q0DWI9, Q6K3E8, Q8GRV3, Q9ZNS8
    UniProtKB/TrEMBL
    A0A6F8FR09

  2. NM_001401998.1 → NP_001388927.1  glutathione reductase, cytosolic

    Status: VALIDATED

    Source sequence(s)
    CB677007, CI072048, D78136
    UniProtKB/Swiss-Prot
    A0A0P0VR51, P48642, Q0DWI9, Q6K3E8, Q8GRV3, Q9ZNS8
    UniProtKB/TrEMBL
    A0A6F8FR09

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    35336150..35342205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P48642.2 GenPept UniProtKB/Swiss-Prot:P48642

Gene LinkOut

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Molecular Biology Databases
Research Materials