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SYTL2 synaptotagmin like 2 [ Gallus gallus (chicken) ]

Gene ID: 426394, updated on 17-Aug-2024

Summary

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Symbol
SYTL2provided by CGNC
Full Name
synaptotagmin like 2provided by CGNC
Primary source
CGNC:10507
See related
Ensembl:ENSGALG00010008111
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
20
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (190169169..190222175, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (190190183..190243304, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106753 Neighboring gene CREB/ATF bZIP transcription factor Neighboring gene coiled-coil domain containing 89 Neighboring gene coiled-coil domain containing 83 Neighboring gene phosphatidylinositol binding clathrin assembly protein Neighboring gene embryonic ectoderm development

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neurexin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in exocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptotagmin-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    190169169..190222175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040647155.2 → XP_040503089.1  synaptotagmin-like protein 2 isoform X5

    Conserved Domains (2) summary
    cd04020
    Location:787 → 943
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:647 → 774
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2

  2. XM_040647156.2 → XP_040503090.1  synaptotagmin-like protein 2 isoform X6

    Conserved Domains (2) summary
    cd04020
    Location:763 → 919
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:623 → 750
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2

  3. XM_424045.8 → XP_424045.4  synaptotagmin-like protein 2 isoform X4

    Conserved Domains (3) summary
    cd04020
    Location:803 → 959
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:663 → 790
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 41
    PHD_SF; PHD finger superfamily

  4. XM_025146920.3 → XP_025002688.2  synaptotagmin-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y470
    Related
    ENSGALP00010010890.1, ENSGALT00010019342.1
    Conserved Domains (2) summary
    cd04020
    Location:1943 → 2099
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:1803 → 1930
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2

  5. XM_025146921.3 → XP_025002689.2  synaptotagmin-like protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0XXZ7
    Related
    ENSGALP00010010891.1, ENSGALT00010019343.1
    Conserved Domains (2) summary
    cd04020
    Location:1919 → 2075
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:1779 → 1906
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2

  6. XM_025146919.3 → XP_025002687.2  synaptotagmin-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XRQ4
    Related
    ENSGALP00010010889.1, ENSGALT00010019341.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    190190183..190243304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040658657.2 → XP_040514591.1  synaptotagmin-like protein 2 isoform X5

    Conserved Domains (2) summary
    cd04020
    Location:787 → 943
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:647 → 774
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2

  2. XM_040658658.2 → XP_040514592.1  synaptotagmin-like protein 2 isoform X6

    Conserved Domains (2) summary
    cd04020
    Location:763 → 919
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:623 → 750
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2

  3. XM_040658656.2 → XP_040514590.1  synaptotagmin-like protein 2 isoform X4

    Conserved Domains (3) summary
    cd04020
    Location:803 → 959
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:663 → 790
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 41
    PHD_SF; PHD finger superfamily

  4. XM_040658654.2 → XP_040514588.1  synaptotagmin-like protein 2 isoform X2

    Conserved Domains (2) summary
    cd04020
    Location:1949 → 2105
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:1809 → 1936
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2

  5. XM_040658655.2 → XP_040514589.1  synaptotagmin-like protein 2 isoform X3

    Conserved Domains (2) summary
    cd04020
    Location:1925 → 2081
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:1785 → 1912
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2

  6. XM_040658653.2 → XP_040514587.1  synaptotagmin-like protein 2 isoform X1

    Conserved Domains (2) summary
    cd04020
    Location:1965 → 2121
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:1825 → 1952
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
Nucleotide Protein
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