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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001166343.2 → NP_001159815.1 beta-1,3-N-acetylglucosaminyltransferase manic fringe isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 5' exon and lacks an alternate 5' coding exon, compared to variant 1, resulting in a protein that maintains the reading frame but is shorter, compared to isoform 1.
- Source sequence(s)
-
AI363008, AK297149, BC094814, BM457814
- Consensus CDS
-
CCDS54525.1
- UniProtKB/TrEMBL
-
A8K7V8
- Related
- ENSP00000413855.3, ENST00000416983.7
- Conserved Domains (1) summary
-
- pfam02434
Location:51 → 286
- Fringe; Fringe-like
-
NM_002405.4 → NP_002396.2 beta-1,3-N-acetylglucosaminyltransferase manic fringe isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AI363008, BC094814
- Consensus CDS
-
CCDS13947.1
- UniProtKB/Swiss-Prot
- B4DLT6, O00587, O43730, Q504S9
- UniProtKB/TrEMBL
-
A8K7V8
- Related
- ENSP00000349490.3, ENST00000356998.8
- Conserved Domains (1) summary
-
- pfam02434
Location:51 → 300
- Fringe; Fringe-like
RNA
-
NR_029413.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AI363008, AK316555, BC094814, DA815501
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000022.11 Reference GRCh38.p14 Primary Assembly
- Range
-
37469063..37486384 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060946.1 Alternate T2T-CHM13v2.0
- Range
-
37929523..37947248 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)