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PMPCA peptidase, mitochondrial processing alpha subunit [ Gallus gallus (chicken) ]

Gene ID: 417134, updated on 17-Aug-2024

Summary

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Symbol
PMPCAprovided by CGNC
Full Name
peptidase, mitochondrial processing alpha subunitprovided by CGNC
Primary source
CGNC:1379
See related
Ensembl:ENSGALG00010028142
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (8490588..8496716, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (7901573..7907701, complement)

Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene SEC16 homolog A, endoplasmic reticulum export factor Neighboring gene inositol polyphosphate-5-phosphatase E Neighboring gene serologically defined colon cancer antigen 3 Neighboring gene small nuclear RNA activating complex polypeptide 4 Neighboring gene caspase recruitment domain family member 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein processing involved in protein targeting to mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial-processing peptidase subunit alpha
Names
peptidase (mitochondrial processing) alpha
NP_001006197.1
XP_025011823.1
XP_046784867.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006197.2 → NP_001006197.1  mitochondrial-processing peptidase subunit alpha

    See identical proteins and their annotated locations for NP_001006197.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000308
    UniProtKB/TrEMBL
    A0A8V1AJI3, Q5ZJ49
    Related
    ENSGALP00010041935.1, ENSGALT00010068192.1
    Conserved Domains (1) summary
    COG0612
    Location:59 → 498
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    8490588..8496716 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025156055.3 → XP_025011823.1  mitochondrial-processing peptidase subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A8V1AJI3, Q5ZJ49
    Related
    ENSGALP00010041936.1, ENSGALT00010068193.1
    Conserved Domains (1) summary
    COG0612
    Location:59 → 498
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7901573..7907701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046928911.1 → XP_046784867.1  mitochondrial-processing peptidase subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A8V1AJI3, Q5ZJ49
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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